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  5. Bradi2g39950

Bradi2g39950


Description : cyclophilin 20-2


Gene families : OG_42_0000307 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000307_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g39950
Cluster HCCA clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Brara.C00549.1 No alias component *(PnsL5) of NDH lumen subcomplex L &... 0.02 Orthogroups_2024-Update
Brara.I03851.1 No alias peptidyl-prolyl cis-trans isomerase *(ROC1/2/3) & EC_5.2... 0.02 Orthogroups_2024-Update
GRMZM2G063244 No alias rotamase CYP 4 0.03 Orthogroups_2024-Update
GRMZM2G135570 No alias cyclophilin 5 0.04 Orthogroups_2024-Update
GRMZM2G326111 No alias Cyclophilin-like peptidyl-prolyl cis-trans isomerase... 0.04 Orthogroups_2024-Update
Glyma.10G298200 No alias cyclophilin 20-2 0.03 Orthogroups_2024-Update
Glyma.18G062900 No alias cyclophilin 5 0.03 Orthogroups_2024-Update
Glyma.20G249300 No alias cyclophilin 20-2 0.05 Orthogroups_2024-Update
HORVU4Hr1G000910.3 No alias peptidyl-prolyl cis-trans isomerase *(ROC1/2/3) & EC_5.2... 0.03 Orthogroups_2024-Update
Kfl00071_0230 kfl00071_0230_v1.1 (q39613|cyph_catro : 197.0) Peptidyl-prolyl cis-trans... 0.03 Orthogroups_2024-Update
Kfl00085_0400 kfl00085_0400_v1.1 (at5g13120 : 254.0) Encodes a lumenal cyclophilin with... 0.02 Orthogroups_2024-Update
Kfl00289_0160 kfl00289_0160_v1.1 (q41651|cypb_vicfa : 197.0) Peptidyl-prolyl cis-trans... 0.01 Orthogroups_2024-Update
Potri.001G060200 No alias cyclophilin 20-2 0.09 Orthogroups_2024-Update
Potri.002G185200 No alias rotamase CYP 4 0.03 Orthogroups_2024-Update
Potri.003G167700 No alias cyclophilin 20-2 0.02 Orthogroups_2024-Update
Pp1s196_68V6 No alias peptidyl-prolyl cis-trans isomerase 0.03 Orthogroups_2024-Update
Seita.3G115000.1 No alias component *(PnsL5) of NDH lumen subcomplex L &... 0.05 Orthogroups_2024-Update
Seita.5G034900.1 No alias peptidyl-prolyl cis-trans isomerase & EC_5.2 cis-trans-isomerase 0.07 Orthogroups_2024-Update
Sobic.003G136400.1 No alias peptidyl-prolyl cis-trans isomerase & EC_5.2 cis-trans-isomerase 0.05 Orthogroups_2024-Update
Sobic.009G001500.1 No alias component *(PnsL5) of NDH lumen subcomplex L &... 0.1 Orthogroups_2024-Update
Solyc01g009990 No alias Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** K4ATJ4_SOLLC) 0.03 Orthogroups_2024-Update
Sopen01g005550 No alias Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 0.03 Orthogroups_2024-Update
Sopen11g002010 No alias Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA InterProScan predictions
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
MF GO:0004455 ketol-acid reductoisomerase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 91 237
No external refs found!