1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi2g40670

Bradi2g40670


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0012398 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0012398_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g40670
Cluster HCCA clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G167422 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Seita.5G193400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G184300.2 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 314 346
IPR002885 Pentatricopeptide_repeat 489 516
IPR002885 Pentatricopeptide_repeat 177 226
IPR002885 Pentatricopeptide_repeat 426 471
IPR002885 Pentatricopeptide_repeat 247 296
IPR002885 Pentatricopeptide_repeat 391 419
No external refs found!