Sopen06g033750

Description : RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

Gene families : OG_42_0003063 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003063_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen06g033750
Cluster	HCCA clusters: Cluster_147

Target	Alias	Description	ECC score	Gene Family Method	Actions
Brara.E01295.1	No alias	component *(U2B) of U2 snRNP complex	0.04	Orthogroups_2024-Update
Kfl00280_0060	kfl00280_0060_v1.1	(at1g06960 : 155.0) RNA-binding (RRM/RBD/RNP motifs)...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	13	83
IPR000504	RRM_dom	161	220

External Links

No external refs found!