Bradi2g43120

Description : pleiotropic drug resistance 12

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi2g43120
Cluster	HCCA clusters: Cluster_224

Target	Alias	Description	ECC score	Gene Family Method
118688	No alias	pleiotropic drug resistance 11	0.02	Orthogroups_2024-Update
173584	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
415867	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
441717	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
At2g26910	No alias	PEC1 [Source:UniProtKB/TrEMBL;Acc:A0A178VNA5]	0.02	Orthogroups_2024-Update
Bradi1g26040	No alias	pleiotropic drug resistance 6	0.03	Orthogroups_2024-Update
Bradi2g10110	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
Bradi2g43150	No alias	pleiotropic drug resistance 12	0.04	Orthogroups_2024-Update
Cre04.g224400	No alias	pleiotropic drug resistance 7	0.02	Orthogroups_2024-Update
GRMZM2G143139	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
Glyma.06G071800	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
Glyma.13G355000	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.04	Orthogroups_2024-Update
Glyma.14G127800	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Glyma.17G120100	No alias	pleiotropic drug resistance 4	0.02	Orthogroups_2024-Update
Glyma.17G206300	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
Glyma.19G169200	No alias	pleiotropic drug resistance 12	0.04	Orthogroups_2024-Update
HORVU4Hr1G081040.4	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
HORVU5Hr1G049490.3	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
HORVU5Hr1G106850.1	No alias	subfamily ABCG transporter	0.05	Orthogroups_2024-Update
Kfl00361_0030	kfl00361_0030_v1.1	(q5z9s8\|pdr12_orysa : 1282.0) Pleiotropic drug...	0.03	Orthogroups_2024-Update
Kfl00616_0050	kfl00616_0050_v1.1	(at1g59870 : 1348.0) ATP binding cassette transporter....	0.02	Orthogroups_2024-Update
LOC_Os09g16458	No alias	pleiotropic drug resistance protein 4, putative, expressed	0.02	Orthogroups_2024-Update
MA_12965g0010	No alias	(q949g3\|pdr1_nicpl : 544.0) Pleiotropic drug resistance...	0.03	Orthogroups_2024-Update
MA_3894g0010	No alias	(q76cu2\|pdr1_tobac : 501.0) Pleiotropic drug resistance...	0.03	Orthogroups_2024-Update
PSME_00001268-RA	No alias	(at1g59870 : 1834.0) ATP binding cassette transporter....	0.02	Orthogroups_2024-Update
PSME_00002220-RA	No alias	(q5z9s8\|pdr12_orysa : 1203.0) Pleiotropic drug...	0.02	Orthogroups_2024-Update
PSME_00009473-RA	No alias	(at2g26910 : 1773.0) pleiotropic drug resistance 4...	0.04	Orthogroups_2024-Update
PSME_00013643-RA	No alias	(q76cu2\|pdr1_tobac : 1408.0) Pleiotropic drug resistance...	0.03	Orthogroups_2024-Update
PSME_00014724-RA	No alias	(q76cu2\|pdr1_tobac : 1860.0) Pleiotropic drug resistance...	0.03	Orthogroups_2024-Update
Potri.001G048700	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Potri.001G048900	No alias	pleiotropic drug resistance 12	0.04	Orthogroups_2024-Update
Potri.018G032900	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Seita.2G152000.1	No alias	subfamily ABCG transporter	0.04	Orthogroups_2024-Update
Seita.2G335300.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Seita.5G115400.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.5G221500.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Seita.5G221600.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Seita.6G234600.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Seita.9G187800.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Seita.9G304200.1	No alias	subfamily ABCG transporter	0.06	Orthogroups_2024-Update
Sobic.001G190900.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Sobic.002G321300.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Sobic.003G215800.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Sobic.003G216000.1	No alias	subfamily ABCG transporter	0.06	Orthogroups_2024-Update
Sobic.003G216166.1	No alias	subfamily ABCG transporter	0.04	Orthogroups_2024-Update
Sobic.003G216232.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Sobic.004G087800.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Sobic.006G114100.4	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Solyc08g067620	No alias	Pleiotropic drug resistance ABC transporter (AHRD V3.3...	0.02	Orthogroups_2024-Update
Solyc09g091660	No alias	Pleiotropic drug resistance ABC transporter (AHRD V3.3...	0.02	Orthogroups_2024-Update
Solyc12g100190	No alias	Pleiotropic drug resistance ABC transporter (AHRD V3.3...	0.03	Orthogroups_2024-Update
Sopen05g032120	No alias	ABC-2 type transporter	0.04	Orthogroups_2024-Update
evm.model.tig00020902.2	No alias	(at3g16340 : 221.0) pleiotropic drug resistance 1...	0.02	Orthogroups_2024-Update
evm.model.tig00020902.3	No alias	(at3g55110 : 182.0) ABC-2 type transporter family...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004425	indole-3-glycerol-phosphate synthase activity	IEP	Predicted GO
MF	GO:0004834	tryptophan synthase activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
BP	GO:0006082	organic acid metabolic process	IEP	Predicted GO
BP	GO:0006520	cellular amino acid metabolic process	IEP	Predicted GO
BP	GO:0006568	tryptophan metabolic process	IEP	Predicted GO
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Predicted GO
BP	GO:0006586	indolalkylamine metabolic process	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
BP	GO:0006855	drug transmembrane transport	IEP	Predicted GO
BP	GO:0008150	biological_process	IEP	Predicted GO
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Predicted GO
BP	GO:0009308	amine metabolic process	IEP	Predicted GO
MF	GO:0015238	drug transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015893	drug transport	IEP	Predicted GO
CC	GO:0016021	integral component of membrane	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016829	lyase activity	IEP	Predicted GO
MF	GO:0016831	carboxy-lyase activity	IEP	Predicted GO
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016836	hydro-lyase activity	IEP	Predicted GO
BP	GO:0019752	carboxylic acid metabolic process	IEP	Predicted GO
MF	GO:0022804	active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
CC	GO:0031224	intrinsic component of membrane	IEP	Predicted GO
BP	GO:0042430	indole-containing compound metabolic process	IEP	Predicted GO
MF	GO:0042623	ATPase activity, coupled	IEP	Predicted GO
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Predicted GO
BP	GO:0043436	oxoacid metabolic process	IEP	Predicted GO
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Predicted GO
BP	GO:0044106	cellular amine metabolic process	IEP	Predicted GO
CC	GO:0044425	membrane part	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
MF	GO:0051287	NAD binding	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	513	724
IPR013525	ABC_2_trans	1178	1392
IPR003439	ABC_transporter-like	881	1033
IPR029481	ABC_trans_N	102	151
IPR003439	ABC_transporter-like	177	359
IPR013581	PDR_assoc	730	794

External Links

No external refs found!

Bradi2g43120

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation