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  5. Bradi2g43735

Bradi2g43735


Description : F-box/RNI-like superfamily protein


Gene families : OG_42_0000187 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000187_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g43735
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Bradi3g19507 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os04g35940 No alias OsFBX135 - F-box domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os10g03730 No alias OsFBX347 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g03740 No alias OsFBX348 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g03910 No alias OsFBX354 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g09360 No alias OsFBX398 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g10230 No alias retrotransposon protein, putative, Ty1-copia subclass, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g10330 No alias OsFBX416 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g10370 No alias OsFBX418 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
Seita.3G255100.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.3G401900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G119800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G381500.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G019650.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006098 pentose-phosphate shunt IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
BP GO:0051156 glucose 6-phosphate metabolic process IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 13 51
No external refs found!