Sopen06g033990

Description : AP2 domain

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen06g033990
Cluster	HCCA clusters: Cluster_67

Target	Alias	Description	ECC score	Gene Family Method
428344	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
A4A49_07545	No alias	pathogenesis-related genes transcriptional activator pti6	0.02	Orthogroups_2024-Update
A4A49_35008	No alias	dehydration-responsive element-binding protein 3	0.02	Orthogroups_2024-Update
A4A49_36835	No alias	ethylene-responsive transcription factor 5	0.02	Orthogroups_2024-Update
A4A49_40581	No alias	ethylene-responsive transcription factor erf106	0.03	Orthogroups_2024-Update
A4A49_42088	No alias	ethylene-responsive transcription factor 13	0.02	Orthogroups_2024-Update
At1g06160	No alias	Ethylene-responsive transcription factor ERF094...	0.03	Orthogroups_2024-Update
At2g25820	No alias	Ethylene-responsive transcription factor ERF042...	0.02	Orthogroups_2024-Update
At4g18450	No alias	Ethylene-responsive transcription factor ERF091...	0.03	Orthogroups_2024-Update
At5g07310	No alias	Ethylene-responsive transcription factor ERF115...	0.03	Orthogroups_2024-Update
At5g25190	No alias	Ethylene-responsive transcription factor ERF003...	0.02	Orthogroups_2024-Update
Bradi2g50035	No alias	ethylene responsive element binding factor 2	0.04	Orthogroups_2024-Update
Bradi3g33355	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi4g31040	No alias	related to AP2 2	0.02	Orthogroups_2024-Update
Bradi4g35600	No alias	C-repeat/DRE binding factor 1	0.02	Orthogroups_2024-Update
Bradi5g24110	No alias	related to AP2 10	0.01	Orthogroups_2024-Update
Brara.A00511.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Brara.C00211.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Brara.D00278.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Brara.F00133.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Brara.H00929.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Brara.H02264.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.I02949.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.J02528.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G039870	No alias	related to AP2 4	0.02	Orthogroups_2024-Update
Glyma.02G066200	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.07G114000	No alias	ethylene-responsive element binding factor 13	0.02	Orthogroups_2024-Update
Glyma.08G137600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.10G007000	No alias	ethylene response factor 1	0.02	Orthogroups_2024-Update
Glyma.20G203500	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
HORVU1Hr1G067110.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
HORVU6Hr1G060140.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
HORVU6Hr1G080340.11	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU6Hr1G090800.2	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.02	Orthogroups_2024-Update
LOC_Os03g05590	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g60120	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g64260	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g48350	No alias	dehydration-responsive element-binding protein,...	0.02	Orthogroups_2024-Update
LOC_Os08g43210	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os10g38000	No alias	dehydration-responsive element-binding protein,...	0.02	Orthogroups_2024-Update
MA_12547g0010	No alias	(at5g25810 : 85.9) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_356609g0010	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
MA_65877g0010	No alias	(at3g16280 : 101.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_96512g0020	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
Mp7g13760.1	No alias	transcription factor (DREB)	0.01	Orthogroups_2024-Update
PSME_00008862-RA	No alias	(q6k7e6\|erf1_orysa : 93.6) Ethylene-responsive...	0.03	Orthogroups_2024-Update
PSME_00014384-RA	No alias	(at5g21960 : 93.6) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00051454-RA	No alias	(at1g19210 : 98.6) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00051455-RA	No alias	(at5g21960 : 102.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
Potri.002G029400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.014G099900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.017G087800	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Pp1s335_8V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.2G215500.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.01	Orthogroups_2024-Update
Seita.3G191900.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Seita.3G278500.1	No alias	transcription factor *(ABI4) & subgroup ERF-IV/DREB2...	0.02	Orthogroups_2024-Update
Seita.4G041600.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.04	Orthogroups_2024-Update
Seita.5G348000.1	No alias	subgroup ERF-VIII transcription factor	0.04	Orthogroups_2024-Update
Seita.5G394300.1	No alias	subgroup ERF-X transcription factor	0.04	Orthogroups_2024-Update
Seita.7G262800.1	No alias	subgroup ERF-II-DEAR transcription factor	0.02	Orthogroups_2024-Update
Seita.8G098100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.9G500100.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Seita.9G516500.1	No alias	subgroup ERF-VII transcription factor	0.02	Orthogroups_2024-Update
Sobic.006G170100.1	No alias	subgroup ERF-III transcription factor	0.06	Orthogroups_2024-Update
Solyc03g118190	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc06g051840	No alias	Solanum lycopersicum Cytokinin Response Factor 6	0.03	Orthogroups_2024-Update
Solyc07g049490	No alias	Ethylene Response Factor F.3	0.03	Orthogroups_2024-Update
Solyc07g054220	No alias	Ethylene-responsive transcription factor ERF053 (AHRD...	0.02	Orthogroups_2024-Update
Solyc10g078610	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Sopen03g033540	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen03g035520	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	97	146

External Links

No external refs found!

Sopen06g033990

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation