Description : Pectin lyase-like superfamily protein
Gene families : OG_42_0002044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002044_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium release: Bradi2g44750 | |
Cluster | HCCA clusters: Cluster_160 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At1g60590 | No alias | Pectin lyase-like superfamily protein... | 0.03 | Orthogroups_2024-Update | |
Glyma.05G005800 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.008G188300 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | IEA | InterProScan predictions |
BP | GO:0005975 | carbohydrate metabolic process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predicted GO |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predicted GO |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predicted GO |
BP | GO:0043038 | amino acid activation | IEP | Predicted GO |
BP | GO:0043039 | tRNA aminoacylation | IEP | Predicted GO |
MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000743 | Glyco_hydro_28 | 221 | 540 |
No external refs found! |