Description : PPR repeat family
Gene families : OG_42_0009640 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009640_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Sopen06g034240 | |
Cluster | HCCA clusters: Cluster_107 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
GRMZM2G304965 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.06 | Orthogroups_2024-Update | |
Glyma.08G254300 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.18G277000 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.004G111300 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | Orthogroups_2024-Update | |
Seita.9G340100.1 | No alias | RNA editing factor *(MEF13) | 0.03 | Orthogroups_2024-Update | |
Solyc06g082880 | No alias | Pentatricopeptide repeat-containing protein, putative... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 219 | 267 |
IPR002885 | Pentatricopeptide_repeat | 524 | 570 |
IPR002885 | Pentatricopeptide_repeat | 422 | 469 |
IPR002885 | Pentatricopeptide_repeat | 119 | 165 |
IPR002885 | Pentatricopeptide_repeat | 623 | 671 |
IPR002885 | Pentatricopeptide_repeat | 497 | 521 |
IPR002885 | Pentatricopeptide_repeat | 62 | 85 |
IPR002885 | Pentatricopeptide_repeat | 324 | 350 |
IPR002885 | Pentatricopeptide_repeat | 90 | 118 |
IPR002885 | Pentatricopeptide_repeat | 698 | 722 |
IPR002885 | Pentatricopeptide_repeat | 396 | 419 |
No external refs found! |