Bradi2g46060

Description : RAB GTPase homolog A1F

Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi2g46060

Target	Alias	Description	ECC score	Gene Family Method
At4g18430	No alias	Ras-related protein RABA1e...	0.02	Orthogroups_2024-Update
Bradi2g49900	No alias	RAB GTPase homolog A1B	0.03	Orthogroups_2024-Update
Brara.H00953.1	No alias	A-class RAB GTPase	0.02	Orthogroups_2024-Update
Brara.K00424.1	No alias	A-class RAB GTPase	0.04	Orthogroups_2024-Update
Glyma.12G165400	No alias	RAB GTPase 11C	0.02	Orthogroups_2024-Update
HORVU1Hr1G001920.3	No alias	A-class RAB GTPase	0.05	Orthogroups_2024-Update
LOC_Os03g62600	No alias	ras-related protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g10940	No alias	ras-related protein, putative, expressed	0.02	Orthogroups_2024-Update
MA_15386g0010	No alias	(at5g60860 : 357.0) RAB GTPase homolog A1F (RABA1f);...	0.02	Orthogroups_2024-Update
Mp3g12050.1	No alias	A-class RAB GTPase	0.01	Orthogroups_2024-Update
PSME_00009105-RA	No alias	(at5g60860 : 357.0) RAB GTPase homolog A1F (RABA1f);...	0.02	Orthogroups_2024-Update
PSME_00054679-RA	No alias	(at3g12160 : 323.0) Encodes RABA4D, a member of the...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
CC	GO:0016021	integral component of membrane	IEP	Predicted GO
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Predicted GO
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
CC	GO:0031224	intrinsic component of membrane	IEP	Predicted GO
CC	GO:0044425	membrane part	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
MF	GO:0051213	dioxygenase activity	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	16	176

External Links

No external refs found!