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  5. Sopen06g034390

Sopen06g034390


Description : EF hand


Gene families : OG_42_0000821 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g034390
Cluster HCCA clusters: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
A4A49_31895 No alias calmodulin-like protein 3 0.04 Orthogroups_2024-Update
Brara.D02625.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
GRMZM2G133588 No alias Calcium-binding EF-hand family protein 0.02 Orthogroups_2024-Update
Glyma.17G112000 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Mp6g18000.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Potri.017G029700 No alias Calcium-binding EF-hand family protein 0.02 Orthogroups_2024-Update
Potri.018G127100 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Solyc05g050750 No alias Calcium-binding protein (AHRD V3.3 *** Q9SCA1_LOTJA) 0.15 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 76 142
IPR002048 EF_hand_dom 6 66
No external refs found!