Bradi2g47210

Description : basic chitinase

Gene families : OG_42_0000472 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi2g47210
Cluster	HCCA clusters: Cluster_79

Target	Alias	Description	ECC score	Gene Family Method
443112	No alias	basic chitinase	0.03	Orthogroups_2024-Update
446851	No alias	basic chitinase	0.03	Orthogroups_2024-Update
A4A49_00786	No alias	acidic endochitinase q	0.04	Orthogroups_2024-Update
A4A49_31315	No alias	endochitinase b	0.04	Orthogroups_2024-Update
At3g12500	No alias	Basic endochitinase B [Source:UniProtKB/Swiss-Prot;Acc:P19171]	0.03	Orthogroups_2024-Update
Bradi2g11140	No alias	Chitinase family protein	0.04	Orthogroups_2024-Update
GRMZM2G064360	No alias	Chitinase family protein	0.03	Orthogroups_2024-Update
GRMZM2G103668	No alias	basic chitinase	0.03	Orthogroups_2024-Update
Glyma.02G042500	No alias	basic chitinase	0.02	Orthogroups_2024-Update
Glyma.16G119200	No alias	basic chitinase	0.03	Orthogroups_2024-Update
HORVU1Hr1G052430.6	No alias	Unknown function	0.04	Orthogroups_2024-Update
LOC_Os05g04690	No alias	CHIT11 - Chitinase family protein precursor, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g51060	No alias	CHIT8 - Chitinase family protein precursor, expressed	0.03	Orthogroups_2024-Update
LOC_Os10g39680	No alias	CHIT14 - Chitinase family protein precursor, expressed	0.02	Orthogroups_2024-Update
MA_8921185g0010	No alias	(q9frv0\|chic_secce : 129.0) Basic endochitinase C...	0.03	Orthogroups_2024-Update
Mp2g24440.1	No alias	Endochitinase CH25 OS=Brassica napus...	0.03	Orthogroups_2024-Update
Mp4g20440.1	No alias	Endochitinase 1 OS=Theobroma cacao (sp\|q41596\|chi1_thecc : 235.0)	0.02	Orthogroups_2024-Update
Mp4g20450.1	No alias	Endochitinase 1 OS=Theobroma cacao (sp\|q41596\|chi1_thecc : 229.0)	0.04	Orthogroups_2024-Update
Mp4g20470.1	No alias	Basic endochitinase B OS=Arabidopsis thaliana...	0.02	Orthogroups_2024-Update
Mp5g02510.1	No alias	no description available(sp\|q949h3\|chi1_hevbr : 195.0)	0.02	Orthogroups_2024-Update
Mp5g21830.1	No alias	Endochitinase CH25 OS=Brassica napus...	0.01	Orthogroups_2024-Update
PSME_00012567-RA	No alias	(p51613\|chib_vitvi : 374.0) Basic endochitinase...	0.02	Orthogroups_2024-Update
PSME_00012569-RA	No alias	(p17514\|chiq_tobac : 260.0) Acidic endochitinase Q...	0.03	Orthogroups_2024-Update
PSME_00045994-RA	No alias	(at3g12500 : 328.0) encodes a basic chitinase involved...	0.04	Orthogroups_2024-Update
PSME_00050349-RA	No alias	(p52403\|chi1_soltu : 337.0) Endochitinase 1 precursor...	0.05	Orthogroups_2024-Update
Potri.014G111800	No alias	Chitinase family protein	0.02	Orthogroups_2024-Update
Pp1s134_173V6	No alias	chitinase	0.03	Orthogroups_2024-Update
Seita.4G286000.1	No alias	basic chitinase *(CHIB)	0.06	Orthogroups_2024-Update
Solyc02g082960	No alias	Chitinase (AHRD V3.3 *** Q9FS45_VITVI)	0.03	Orthogroups_2024-Update
Solyc10g055820	No alias	Chitinase (AHRD V3.3 *** B9VRK7_CAPAN)	0.04	Orthogroups_2024-Update
Solyc10g074440	No alias	Chitinase (AHRD V3.3 *** B9VRK7_CAPAN)	0.02	Orthogroups_2024-Update
Solyc10g074460	No alias	Chitinase (AHRD V3.3 *** B9VRK7_CAPAN)	0.02	Orthogroups_2024-Update
Sopen02g027710	No alias	Chitinase class I	0.02	Orthogroups_2024-Update
Sopen02g027750	No alias	Chitinase class I	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	InterProScan predictions
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008061	chitin binding	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	InterProScan predictions
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0042737	drug catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
CC	GO:0005839	proteasome core complex	IEP	Predicted GO
BP	GO:0006099	tricarboxylic acid cycle	IEP	Predicted GO
BP	GO:0006101	citrate metabolic process	IEP	Predicted GO
BP	GO:0006417	regulation of translation	IEP	Predicted GO
BP	GO:0006694	steroid biosynthetic process	IEP	Predicted GO
BP	GO:0008202	steroid metabolic process	IEP	Predicted GO
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Predicted GO
BP	GO:0009890	negative regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0010207	photosystem II assembly	IEP	Predicted GO
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Predicted GO
BP	GO:0015977	carbon fixation	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0016829	lyase activity	IEP	Predicted GO
MF	GO:0016843	amine-lyase activity	IEP	Predicted GO
MF	GO:0016844	strictosidine synthase activity	IEP	Predicted GO
BP	GO:0016999	antibiotic metabolic process	IEP	Predicted GO
BP	GO:0017148	negative regulation of translation	IEP	Predicted GO
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
MF	GO:0030597	RNA glycosylase activity	IEP	Predicted GO
MF	GO:0030598	rRNA N-glycosylase activity	IEP	Predicted GO
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	Predicted GO
BP	GO:0032269	negative regulation of cellular protein metabolic process	IEP	Predicted GO
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Predicted GO
BP	GO:0034249	negative regulation of cellular amide metabolic process	IEP	Predicted GO
BP	GO:0051248	negative regulation of protein metabolic process	IEP	Predicted GO
MF	GO:0070003	threonine-type peptidase activity	IEP	Predicted GO
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Predicted GO
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	Predicted GO
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001002	Chitin-bd_1	24	61
IPR000726	Glyco_hydro_19_cat	84	315

External Links

No external refs found!

Bradi2g47210

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation