Bradi2g47337

Description : ATP binding cassette subfamily B4

Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi2g47337
Cluster	HCCA clusters: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
123915	No alias	P-glycoprotein 11	0.03	Orthogroups_2024-Update
139408	No alias	P-glycoprotein 20	0.04	Orthogroups_2024-Update
92485	No alias	ATP binding cassette subfamily B19	0.02	Orthogroups_2024-Update
A4A49_15329	No alias	abc transporter b family member 20	0.02	Orthogroups_2024-Update
At3g28360	No alias	ABC transporter B family member 16...	0.04	Orthogroups_2024-Update
Bradi3g06577	No alias	ABC transporter family protein	0.03	Orthogroups_2024-Update
Bradi3g20045	No alias	ATP binding cassette subfamily B4	0.03	Orthogroups_2024-Update
Brara.D00408.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Brara.F00715.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Brara.F03154.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Brara.J00114.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
GRMZM2G085236	No alias	ATP binding cassette subfamily B19	0.05	Orthogroups_2024-Update
GRMZM2G167658	No alias	ATP binding cassette subfamily B19	0.02	Orthogroups_2024-Update
Glyma.13G119000	No alias	P-glycoprotein 11	0.02	Orthogroups_2024-Update
Glyma.14G220200	No alias	P-glycoprotein 13	0.03	Orthogroups_2024-Update
Glyma.17G041300	No alias	ATP binding cassette subfamily B4	0.03	Orthogroups_2024-Update
HORVU0Hr1G015570.6	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
HORVU2Hr1G001450.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
HORVU3Hr1G065320.10	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU3Hr1G068650.8	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Kfl00008_0360	kfl00008_0360_v1.1	(at1g02520 : 1200.0) P-glycoprotein 11 (PGP11);...	0.01	Orthogroups_2024-Update
Kfl00461_0020	kfl00461_0020_v1.1	(at3g28860 : 1090.0) Belongs to the family of...	0.02	Orthogroups_2024-Update
LOC_Os01g29870	No alias	multidrug resistance protein 9, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os01g34970	No alias	MDR-like ABC transporter, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g38570	No alias	multidrug resistance protein, putative, expressed	0.05	Orthogroups_2024-Update
LOC_Os04g40570	No alias	ABC transporter, ATP-binding protein, putative, expressed	0.02	Orthogroups_2024-Update
MA_18863g0010	No alias	(at2g47000 : 769.0) Multidrug resistance P-glycoprotein...	0.02	Orthogroups_2024-Update
PSME_00005534-RA	No alias	(at3g62150 : 1137.0) P-glycoprotein 21 (PGP21);...	0.02	Orthogroups_2024-Update
PSME_00014276-RA	No alias	(at3g55320 : 2001.0) P-glycoprotein 20 (PGP20);...	0.02	Orthogroups_2024-Update
PSME_00016535-RA	No alias	(at3g28860 : 1775.0) Belongs to the family of...	0.03	Orthogroups_2024-Update
PSME_00035518-RA	No alias	(at2g39480 : 1505.0) P-glycoprotein 6 (PGP6); FUNCTIONS...	0.02	Orthogroups_2024-Update
PSME_00035545-RA	No alias	(q6yuu5\|mdr_orysa : 1259.0) Putative multidrug...	0.02	Orthogroups_2024-Update
PSME_00037351-RA	No alias	(at3g28345 : 1429.0) ABC transporter family protein;...	0.03	Orthogroups_2024-Update
PSME_00037733-RA	No alias	(at3g28345 : 1445.0) ABC transporter family protein;...	0.02	Orthogroups_2024-Update
Potri.001G165000	No alias	ATP binding cassette subfamily B19	0.02	Orthogroups_2024-Update
Potri.010G003000	No alias	ATP binding cassette subfamily B4	0.04	Orthogroups_2024-Update
Potri.014G113100	No alias	P-glycoprotein 11	0.04	Orthogroups_2024-Update
Potri.014G113500	No alias	P-glycoprotein 21	0.05	Orthogroups_2024-Update
Potri.018G087100	No alias	ABC transporter family protein	0.02	Orthogroups_2024-Update
Potri.018G141300	No alias	ABC transporter family protein	0.03	Orthogroups_2024-Update
Pp1s391_45V6	No alias	multidrug pheromone mdr abc transporter family	0.02	Orthogroups_2024-Update
Seita.1G055700.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Seita.1G145300.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Seita.5G031800.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Seita.5G189700.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Seita.5G283500.1	No alias	subfamily ABCB transporter	0.04	Orthogroups_2024-Update
Seita.5G283600.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Seita.5G283700.1	No alias	subfamily ABCB transporter	0.04	Orthogroups_2024-Update
Seita.9G449100.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Sobic.001G415300.1	No alias	subfamily ABCB transporter	0.06	Orthogroups_2024-Update
Sobic.003G180400.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Sobic.003G267300.1	No alias	subfamily ABCB transporter	0.05	Orthogroups_2024-Update
Sobic.003G281400.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Sobic.004G073400.1	No alias	subfamily ABCB transporter	0.05	Orthogroups_2024-Update
Sobic.006G105600.1	No alias	auxin efflux transporter *(ABCB19) & subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Solyc04g010310	No alias	ABC transporter B family protein (AHRD V3.3 *** A0A072VSU0_MEDTR)	0.02	Orthogroups_2024-Update
evm.model.tig00000741.4	No alias	(at3g62150 : 432.0) P-glycoprotein 21 (PGP21); FUNCTIONS...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Predicted GO
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
MF	GO:0005516	calmodulin binding	IEP	Predicted GO
BP	GO:0006464	cellular protein modification process	IEP	Predicted GO
BP	GO:0006468	protein phosphorylation	IEP	Predicted GO
BP	GO:0006486	protein glycosylation	IEP	Predicted GO
BP	GO:0006793	phosphorus metabolic process	IEP	Predicted GO
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006807	nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0008037	cell recognition	IEP	Predicted GO
BP	GO:0008152	metabolic process	IEP	Predicted GO
MF	GO:0008378	galactosyltransferase activity	IEP	Predicted GO
BP	GO:0009987	cellular process	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
BP	GO:0016310	phosphorylation	IEP	Predicted GO
BP	GO:0016567	protein ubiquitination	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Predicted GO
BP	GO:0022414	reproductive process	IEP	Predicted GO
MF	GO:0030246	carbohydrate binding	IEP	Predicted GO
MF	GO:0030247	polysaccharide binding	IEP	Predicted GO
BP	GO:0032446	protein modification by small protein conjugation	IEP	Predicted GO
BP	GO:0036211	protein modification process	IEP	Predicted GO
BP	GO:0043170	macromolecule metabolic process	IEP	Predicted GO
BP	GO:0043412	macromolecule modification	IEP	Predicted GO
BP	GO:0043413	macromolecule glycosylation	IEP	Predicted GO
MF	GO:0043531	ADP binding	IEP	Predicted GO
BP	GO:0044237	cellular metabolic process	IEP	Predicted GO
BP	GO:0044238	primary metabolic process	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044267	cellular protein metabolic process	IEP	Predicted GO
BP	GO:0048544	recognition of pollen	IEP	Predicted GO
BP	GO:0070085	glycosylation	IEP	Predicted GO
BP	GO:0071704	organic substance metabolic process	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	709	978
IPR011527	ABC1_TM_dom	56	327
IPR003439	ABC_transporter-like	395	544
IPR003439	ABC_transporter-like	1050	1198

External Links

No external refs found!

Bradi2g47337

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation