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  5. Bradi2g48620

Bradi2g48620


Description : pleiotropic drug resistance 1


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g48620
Cluster HCCA clusters: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
Seita.9G001100.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
evm.model.tig00000270.11 No alias (q7fmw4|pdr15_orysa : 250.0) Pleiotropic drug resistance... 0.01 Orthogroups_2024-Update
evm.model.tig00000411.51 No alias (at2g29940 : 159.0) pleiotropic drug resistance 3... 0.01 Orthogroups_2024-Update
evm.model.tig00020902.2 No alias (at3g16340 : 221.0) pleiotropic drug resistance 1... 0.01 Orthogroups_2024-Update
evm.model.tig00020902.3 No alias (at3g55110 : 182.0) ABC-2 type transporter family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 507 718
IPR013525 ABC_2_trans 1190 1403
IPR003439 ABC_transporter-like 173 353
IPR029481 ABC_trans_N 91 148
IPR003439 ABC_transporter-like 893 1044
IPR013581 PDR_assoc 724 786
No external refs found!