Bradi2g48990

Description : heat shock transcription factor C1

Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi2g48990
Cluster	HCCA clusters: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
92634	No alias	heat shock transcription factor B4	0.03	Orthogroups_2024-Update
A4A49_05282	No alias	heat stress transcription factor a-8	0.03	Orthogroups_2024-Update
A4A49_29201	No alias	heat shock factor protein hsf24	0.02	Orthogroups_2024-Update
A4A49_38289	No alias	heat stress transcription factor a-1	0.03	Orthogroups_2024-Update
At3g63350	No alias	Heat stress transcription factor A-7b...	0.03	Orthogroups_2024-Update
Brara.C02682.1	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
Brara.C03963.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Brara.D00624.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G118047	No alias	heat shock transcription factor C1	0.06	Orthogroups_2024-Update
GRMZM2G301485	No alias	heat shock transcription factor B2A	0.03	Orthogroups_2024-Update
Glyma.05G240500	No alias	heat shock transcription factor A8	0.03	Orthogroups_2024-Update
Glyma.06G040900	No alias	heat shock transcription factor B4	0.04	Orthogroups_2024-Update
Glyma.08G047400	No alias	heat shock transcription factor A8	0.04	Orthogroups_2024-Update
Glyma.09G190600	No alias	heat shock transcription factor C1	0.04	Orthogroups_2024-Update
Glyma.19G159500	No alias	heat shock transcription factor A6B	0.03	Orthogroups_2024-Update
Glyma.20G150300	No alias	heat shock transcription factor A6B	0.04	Orthogroups_2024-Update
HORVU4Hr1G073650.2	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os08g36700	No alias	HSF-type DNA-binding domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_10432269g0010	No alias	(at5g16820 : 282.0) Encodes a putative transcription...	0.02	Orthogroups_2024-Update
PSME_00029303-RA	No alias	(at5g62020 : 98.6) member of Heat Stress Transcription...	0.03	Orthogroups_2024-Update
PSME_00055440-RA	No alias	(at3g22830 : 268.0) member of Heat Stress Transcription...	0.03	Orthogroups_2024-Update
Potri.006G049200	No alias	heat shock transcription factor B3	0.02	Orthogroups_2024-Update
Potri.T137400	No alias	heat shock transcription factor C1	0.02	Orthogroups_2024-Update
Seita.5G318300.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Seita.7G202900.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.007G180300.2	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Solyc08g080540	No alias	SolycHsfB2b	0.03	Orthogroups_2024-Update
Solyc09g059520	No alias	SolycHsfA8	0.03	Orthogroups_2024-Update
Sopen02g020980	No alias	HSF-type DNA-binding	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	Predicted GO
MF	GO:0004664	prephenate dehydratase activity	IEP	Predicted GO
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEP	Predicted GO
MF	GO:0005198	structural molecule activity	IEP	Predicted GO
CC	GO:0005840	ribosome	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0006412	translation	IEP	Predicted GO
BP	GO:0006518	peptide metabolic process	IEP	Predicted GO
BP	GO:0006558	L-phenylalanine metabolic process	IEP	Predicted GO
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	Predicted GO
BP	GO:0009058	biosynthetic process	IEP	Predicted GO
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Predicted GO
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Predicted GO
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	Predicted GO
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Predicted GO
MF	GO:0016836	hydro-lyase activity	IEP	Predicted GO
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Predicted GO
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Predicted GO
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predicted GO
BP	GO:0043043	peptide biosynthetic process	IEP	Predicted GO
CC	GO:0043228	non-membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Predicted GO
BP	GO:0043603	cellular amide metabolic process	IEP	Predicted GO
BP	GO:0043604	amide biosynthetic process	IEP	Predicted GO
BP	GO:0044249	cellular biosynthetic process	IEP	Predicted GO
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Predicted GO
BP	GO:1901576	organic substance biosynthetic process	IEP	Predicted GO
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Predicted GO
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	Predicted GO
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	Predicted GO
CC	GO:1990904	ribonucleoprotein complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	25	114

External Links

No external refs found!

Bradi2g48990

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation