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  5. Bradi2g49420

Bradi2g49420


Description : phytochrome-associated protein 1


Gene families : OG_42_0000083 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g49420
Cluster HCCA clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
A4A49_29351 No alias auxin-responsive protein iaa17 0.03 Orthogroups_2024-Update
At3g04730 No alias Auxin-responsive protein IAA16... 0.04 Orthogroups_2024-Update
At4g14560 No alias Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:Q67YC2] 0.02 Orthogroups_2024-Update
Brara.D01350.1 No alias transcriptional repressor *(IAA/AUX) 0.04 Orthogroups_2024-Update
Brara.F02766.1 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
Glyma.10G040400 No alias indole-3-acetic acid inducible 11 0.03 Orthogroups_2024-Update
Glyma.15G012700 No alias AUX/IAA transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Glyma.19G245200 No alias indoleacetic acid-induced protein 16 0.03 Orthogroups_2024-Update
Glyma.20G225000 No alias indoleacetic acid-induced protein 16 0.03 Orthogroups_2024-Update
LOC_Os01g48444 No alias OsIAA5 - Auxin-responsive Aux/IAA gene family member, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g53880 No alias OsIAA6 - Auxin-responsive Aux/IAA gene family member, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g14180 No alias OsIAA17 - Auxin-responsive Aux/IAA gene family member, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g22870 No alias OsIAA21 - Auxin-responsive Aux/IAA gene family member, expressed 0.02 Orthogroups_2024-Update
MA_10431093g0030 No alias (p0c132|iaa30_orysa : 229.0) Auxin-responsive protein... 0.02 Orthogroups_2024-Update
MA_18664g0010 No alias (at3g16500 : 144.0) phytochrome-associated protein 1... 0.03 Orthogroups_2024-Update
PSME_00022723-RA No alias (p0c132|iaa30_orysa : 223.0) Auxin-responsive protein... 0.02 Orthogroups_2024-Update
PSME_00041783-RA No alias (at3g16500 : 145.0) phytochrome-associated protein 1... 0.02 Orthogroups_2024-Update
Potri.002G256600 No alias indole-3-acetic acid inducible 11 0.03 Orthogroups_2024-Update
Potri.003G051300 No alias phytochrome-associated protein 2 0.03 Orthogroups_2024-Update
Potri.010G078400 No alias AUX/IAA transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Potri.013G041400 No alias indoleacetic acid-induced protein 16 0.03 Orthogroups_2024-Update
Seita.3G109400.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Sobic.003G044900.1 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
Solyc06g053830 No alias auxin-regulated IAA7 0.03 Orthogroups_2024-Update
Sopen01g040960 No alias AUX/IAA family 0.02 Orthogroups_2024-Update
Sopen09g027640 No alias AUX/IAA family 0.02 Orthogroups_2024-Update
Sopen09g032200 No alias AUX/IAA family 0.02 Orthogroups_2024-Update
Sopen09g033890 No alias AUX/IAA family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0000782 telomere cap complex IEP Predicted GO
CC GO:0000783 nuclear telomere cap complex IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
BP GO:0006658 phosphatidylserine metabolic process IEP Predicted GO
BP GO:0006659 phosphatidylserine biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
CC GO:1990879 CST complex IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 48 331
No external refs found!