1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi2g50020

Bradi2g50020


Description : Ribosomal protein L18ae/LX family protein


Gene families : OG_42_0001510 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001510_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g50020
Cluster HCCA clusters: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
227198 No alias Ribosomal protein L18ae/LX family protein 0.09 Orthogroups_2024-Update
A4A49_41727 No alias 60s ribosomal protein l18a 0.03 Orthogroups_2024-Update
A4A49_56604 No alias 60s ribosomal protein l18a 0.04 Orthogroups_2024-Update
At3g14600 No alias 60S ribosomal protein L18a-3... 0.04 Orthogroups_2024-Update
Brara.C01744.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Brara.C03533.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.D02096.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Brara.E00977.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Brara.E02666.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Cre01.g047750 No alias Ribosomal protein L18ae/LX family protein 0.07 Orthogroups_2024-Update
GRMZM2G022619 No alias Ribosomal protein L18ae/LX family protein 0.06 Orthogroups_2024-Update
Glyma.02G284900 No alias Ribosomal protein L18ae/LX family protein 0.05 Orthogroups_2024-Update
Glyma.14G029901 No alias Ribosomal protein L18ae/LX family protein 0.12 Orthogroups_2024-Update
Glyma.15G095400 No alias Ribosomal protein L18ae/LX family protein 0.11 Orthogroups_2024-Update
Glyma.18G110000 No alias Ribosomal protein L18ae/LX family protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G088040.2 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Kfl00905_0040 kfl00905_0040_v1.1 (at2g34480 : 295.0) Ribosomal protein L18ae/LX family... 0.04 Orthogroups_2024-Update
LOC_Os01g47660 No alias 60S ribosomal protein L18a, putative, expressed 0.03 Orthogroups_2024-Update
MA_12029g0010 No alias (q943f3|rl18a_orysa : 339.0) 60S ribosomal protein L18a... 0.04 Orthogroups_2024-Update
Mp1g17730.1 No alias component RPL18a of LSU proteome component 0.08 Orthogroups_2024-Update
Potri.002G057600 No alias Ribosomal protein L18ae/LX family protein 0.07 Orthogroups_2024-Update
Pp1s184_111V6 No alias 60s ribosomal protein l18a 0.14 Orthogroups_2024-Update
Pp1s44_13V6 No alias 60s ribosomal protein l18a 0.03 Orthogroups_2024-Update
Pp1s56_243V6 No alias 60s ribosomal protein l18a 0.05 Orthogroups_2024-Update
Pp1s74_193V6 No alias 60s ribosomal protein l18a 0.15 Orthogroups_2024-Update
Seita.3G145500.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Seita.5G262600.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Seita.8G085600.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.003G249700.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Sobic.005G091700.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Sobic.009G233400.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.18 Orthogroups_2024-Update
Solyc02g070640 No alias 60S ribosomal protein L18a (AHRD V3.3 *** Q3HRW8_SOLTU) 0.18 Orthogroups_2024-Update
Solyc02g070650 No alias 60S ribosomal protein L18a (AHRD V3.3 *** Q3HRW8_SOLTU) 0.16 Orthogroups_2024-Update
Solyc06g065590 No alias 60S ribosomal protein L18a (AHRD V3.3 *** K4C7I8_SOLLC) 0.1 Orthogroups_2024-Update
Solyc08g016180 No alias 60S ribosomal protein L18a (AHRD V3.3 *** K4CJE2_SOLLC) 0.11 Orthogroups_2024-Update
Sopen02g019720 No alias Ribosomal L18ae/LX protein domain 0.03 Orthogroups_2024-Update
Sopen02g019730 No alias Ribosomal L18ae/LX protein domain 0.06 Orthogroups_2024-Update
Sopen06g024090 No alias Ribosomal L18ae/LX protein domain 0.06 Orthogroups_2024-Update
Sopen08g006530 No alias Ribosomal L18ae/LX protein domain 0.13 Orthogroups_2024-Update
evm.model.contig_448.2 No alias (q943f3|rl18a_orysa : 186.0) 60S ribosomal protein L18a... 0.14 Orthogroups_2024-Update
evm.model.tig00000615.59 No alias (at1g29970 : 221.0) 60S ribosomal protein L18A-1;... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR023573 Ribosomal_L18a//L18Ae/LX 7 128
No external refs found!