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  5. Bradi2g50200

Bradi2g50200


Description : RING/U-box superfamily protein


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g50200
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
A4A49_10724 No alias ring-h2 finger protein atl33 0.02 Orthogroups_2024-Update
A4A49_24009 No alias ring-h2 finger protein atl3 0.03 Orthogroups_2024-Update
A4A49_59878 No alias ring-h2 finger protein atl60 0.02 Orthogroups_2024-Update
At4g09130 No alias Putative RING-H2 finger protein ATL37... 0.02 Orthogroups_2024-Update
Bradi3g09395 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G070100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G191800 No alias RING/U-box superfamily protein 0.06 Orthogroups_2024-Update
HORVU3Hr1G028410.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU6Hr1G029910.1 No alias Unknown function 0.05 Orthogroups_2024-Update
MA_10432957g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_9143538g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_9591879g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Seita.1G197400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G305000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.009G205400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sopen02g016820 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen06g015390 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005811 lipid droplet IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 112 156
No external refs found!