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  5. Bradi2g50940

Bradi2g50940


Description : RING/U-box superfamily protein


Gene families : OG_42_0000548 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g50940
Cluster HCCA clusters: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Brara.C02146.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.03 Orthogroups_2024-Update
GRMZM2G400268 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.04G034500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.011G051800 No alias RING membrane-anchor 1 0.02 Orthogroups_2024-Update
Pp1s72_212V6 No alias zinc c3hc4 type family protein 0.04 Orthogroups_2024-Update
Seita.7G053100.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.02 Orthogroups_2024-Update
Solyc02g078320 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT1G19310.1) 0.04 Orthogroups_2024-Update
Sopen02g023160 No alias Zinc finger, C3HC4 type (RING finger) 0.01 Orthogroups_2024-Update
Sopen10g022970 No alias Zinc finger, C3HC4 type (RING finger) 0.02 Orthogroups_2024-Update
Sopen12g005320 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 23 61
No external refs found!