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  5. Sopen06g034900

Sopen06g034900


Description : 50S ribosome-binding GTPase


Gene families : OG_42_0003992 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003992_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g034900
Cluster HCCA clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Bradi1g31710 No alias GTP-binding family protein 0.12 Orthogroups_2024-Update
Bradi1g76700 No alias GTP-binding family protein 0.09 Orthogroups_2024-Update
Brara.A03628.1 No alias regulatory GTPase (NUG1/NSN1) of LSU processome 0.06 Orthogroups_2024-Update
Brara.C03191.1 No alias regulatory GTPase (NUG1/NSN1) of LSU processome 0.06 Orthogroups_2024-Update
Brara.E03243.1 No alias regulatory GTPase (NUG1/NSN1) of LSU processome 0.04 Orthogroups_2024-Update
Cre12.g533050 No alias GTP-binding family protein 0.06 Orthogroups_2024-Update
Glyma.10G122200 No alias GTP-binding family protein 0.07 Orthogroups_2024-Update
HORVU2Hr1G016650.1 No alias regulatory GTPase (NUG1/NSN1) of LSU processome 0.05 Orthogroups_2024-Update
Kfl00223_0170 kfl00223_0170_v1.... (at3g07050 : 427.0) GTP-binding family protein;... 0.04 Orthogroups_2024-Update
Mp8g17210.1 No alias NUG1/NSN1 LSU processome regulatory GTPase 0.03 Orthogroups_2024-Update
Potri.002G241100 No alias GTP-binding family protein 0.04 Orthogroups_2024-Update
Pp1s91_142V6 No alias guanine nucleotide binding protein 3 0.08 Orthogroups_2024-Update
Seita.9G087300.1 No alias regulatory GTPase (NUG1/NSN1) of LSU processome 0.09 Orthogroups_2024-Update
Sobic.001G177100.1 No alias regulatory GTPase (NUG1/NSN1) of LSU processome 0.08 Orthogroups_2024-Update
Solyc06g083520 No alias GTP-binding family protein (AHRD V3.3 *** A0A061DNE0_THECC) 0.08 Orthogroups_2024-Update
Solyc09g061430 No alias nuclear GTPase DQ304482 0.07 Orthogroups_2024-Update
evm.model.contig_2299.5 No alias (at3g07050 : 275.0) GTP-binding family protein;... 0.04 Orthogroups_2024-Update
evm.model.tig00001215.14 No alias (at3g07050 : 206.0) GTP-binding family protein;... 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006073 GTP_binding_domain 269 331
IPR014813 Gnl3_N_dom 16 91
No external refs found!