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  5. Sopen06g034920

Sopen06g034920


Description : Alba


Gene families : OG_42_0000903 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000903_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g034920
Cluster HCCA clusters: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
140429 No alias Alba DNA/RNA-binding protein 0.03 Orthogroups_2024-Update
Bradi1g09507 No alias Alba DNA/RNA-binding protein 0.02 Orthogroups_2024-Update
Brara.H02335.1 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.04 Orthogroups_2024-Update
GRMZM2G164088 No alias Alba DNA/RNA-binding protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G074450.3 No alias Unknown function 0.07 Orthogroups_2024-Update
HORVU5Hr1G084510.3 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.06 Orthogroups_2024-Update
Potri.002G017600 No alias Alba DNA/RNA-binding protein 0.02 Orthogroups_2024-Update
Seita.9G102600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G528100.1 No alias Unknown function 0.09 Orthogroups_2024-Update
Sobic.001G099800.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Sobic.001G493400.2 No alias Unknown function 0.11 Orthogroups_2024-Update
Sobic.002G281600.1 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.02 Orthogroups_2024-Update
Solyc06g083540 No alias Alba DNA/RNA-binding protein (AHRD V3.3 *-* AT3G07030.5) 0.17 Orthogroups_2024-Update
Solyc09g061710 No alias Alba DNA/RNA-binding protein (AHRD V3.3 *-* AT3G07030.5) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002775 DNA/RNA-bd_Alba-like 19 76
No external refs found!