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  5. Bradi2g52140

Bradi2g52140


Description : methylesterase PCR A


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g52140
Cluster HCCA clusters: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
A4A49_03154 No alias putative pectinesterasepectinesterase inhibitor 60 0.03 Orthogroups_2024-Update
A4A49_33399 No alias putative pectinesterasepectinesterase inhibitor 58 0.02 Orthogroups_2024-Update
At1g11580 No alias methylesterase PCR A [Source:TAIR;Acc:AT1G11580] 0.03 Orthogroups_2024-Update
At2g26440 No alias Probable pectinesterase/pectinesterase inhibitor 12... 0.03 Orthogroups_2024-Update
At5g53370 No alias pectin methylesterase PCR fragment F [Source:TAIR;Acc:AT5G53370] 0.02 Orthogroups_2024-Update
Brara.B01456.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.F01763.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.J00839.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.K01158.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
GRMZM2G025182 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.06 Orthogroups_2024-Update
Glyma.01G138000 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.01G138100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.03G029400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.06G319100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.07G024200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Glyma.07G024300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
PSME_00012293-RA No alias (o04887|pme2_citsi : 426.0) Pectinesterase-2 precursor... 0.04 Orthogroups_2024-Update
PSME_00020069-RA No alias (p83948|pme3_citsi : 450.0) Pectinesterase-3 precursor... 0.02 Orthogroups_2024-Update
PSME_00026861-RA No alias (at1g53830 : 537.0) encodes a pectin methylesterase;... 0.02 Orthogroups_2024-Update
PSME_00029101-RA No alias (at1g53830 : 536.0) encodes a pectin methylesterase;... 0.03 Orthogroups_2024-Update
PSME_00038239-RA No alias (at3g49220 : 547.0) Plant invertase/pectin... 0.03 Orthogroups_2024-Update
PSME_00038370-RA No alias (o04887|pme2_citsi : 476.0) Pectinesterase-2 precursor... 0.03 Orthogroups_2024-Update
PSME_00043969-RA No alias (at1g53830 : 497.0) encodes a pectin methylesterase;... 0.02 Orthogroups_2024-Update
PSME_00048380-RA No alias (at4g02330 : 476.0) ATPMEPCRB; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
PSME_00056054-RA No alias (at4g02330 : 471.0) ATPMEPCRB; FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
Pp1s32_31V6 No alias putative pectin esterase [Oryza sativa (japonica cultivar-group)] 0.03 Orthogroups_2024-Update
Seita.5G450500.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.04 Orthogroups_2024-Update
Sobic.010G071300.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Solyc03g083360 No alias Pectinesterase (AHRD V3.3 *** K4BIB2_SOLLC) 0.03 Orthogroups_2024-Update
Solyc06g009190 No alias Pectinesterase (AHRD V3.3 *** K4C3U9_SOLLC) 0.02 Orthogroups_2024-Update
Solyc07g017600 No alias Pectinesterase (AHRD V3.3 *** K4CCH4_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 51 192
IPR000070 Pectinesterase_cat 238 534
No external refs found!