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  5. Bradi2g52710

Bradi2g52710


Description : Ribosomal protein L34


Gene families : OG_42_0007337 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007337_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g52710
Cluster HCCA clusters: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
A4A49_33698 No alias 50s ribosomal protein l34, chloroplastic 0.07 Orthogroups_2024-Update
Brara.H01969.1 No alias component *(bL34c) of large plastid ribosomal-subunit proteome 0.09 Orthogroups_2024-Update
Brara.I02922.1 No alias component *(bL34c) of large plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Cre01.g030050 No alias Ribosomal protein L34 0.16 Orthogroups_2024-Update
Glyma.13G230600 No alias Ribosomal protein L34 0.09 Orthogroups_2024-Update
Glyma.15G082000 No alias Ribosomal protein L34 0.05 Orthogroups_2024-Update
HORVU3Hr1G078780.2 No alias component *(bL34c) of large plastid ribosomal-subunit proteome 0.12 Orthogroups_2024-Update
Kfl00083_0050 kfl00083_0050_v1.1 no hits & (original description: no original description) 0.12 Orthogroups_2024-Update
LOC_Os01g59060 No alias 50S ribosomal protein, putative, expressed 0.04 Orthogroups_2024-Update
MA_10435644g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Mp1g06530.1 No alias component psRPL34 of large ribosomal subunit proteome 0.02 Orthogroups_2024-Update
Potri.011G064800 No alias Ribosomal protein L34 0.15 Orthogroups_2024-Update
Pp1s27_326V6 No alias 50s ribosomal protein l34 0.12 Orthogroups_2024-Update
Seita.5G352400.1 No alias component *(bL34c) of large plastid ribosomal-subunit proteome 0.08 Orthogroups_2024-Update
Sobic.003G328000.1 No alias component *(bL34c) of large plastid ribosomal-subunit proteome 0.11 Orthogroups_2024-Update
Solyc01g056780 No alias 50S ribosomal protein L34 (AHRD V3.3 *** W9QWL4_9ROSA) 0.08 Orthogroups_2024-Update
Sopen01g025250 No alias Ribosomal protein L34 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006450 regulation of translational fidelity IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000271 Ribosomal_L34 115 149
No external refs found!