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  5. Bradi2g52790

Bradi2g52790


Description : beta-6 tubulin


Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g52790
Cluster HCCA clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
23468 No alias tubulin beta 8 0.02 Orthogroups_2024-Update
A4A49_57434 No alias tubulin beta-8 chain 0.02 Orthogroups_2024-Update
At1g75780 No alias Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:P12411] 0.04 Orthogroups_2024-Update
At5g12250 No alias Tubulin beta chain [Source:UniProtKB/TrEMBL;Acc:A0A178UPR2] 0.03 Orthogroups_2024-Update
At5g23860 No alias Tubulin beta chain [Source:UniProtKB/TrEMBL;Acc:A0A178UKM5] 0.03 Orthogroups_2024-Update
Brara.F03751.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Brara.J02165.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Brara.K01811.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Cre12.g542250 No alias tubulin beta chain 2 0.01 Orthogroups_2024-Update
Cre12.g549550 No alias tubulin beta chain 2 0.02 Orthogroups_2024-Update
Glyma.10G235100 No alias tubulin beta 8 0.04 Orthogroups_2024-Update
Kfl00215_0220 kfl00215_0220_v1.1 (p04690|tbb_chlre : 826.0) Tubulin beta-1/beta-2 chain -... 0.02 Orthogroups_2024-Update
LOC_Os03g56810 No alias tubulin/FtsZ domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_72744g0010 No alias (q40665|tbb3_orysa : 805.0) Tubulin beta-3 chain (Beta-3... 0.03 Orthogroups_2024-Update
PSME_00001574-RA No alias (q76fs3|tbb6_orysa : 424.0) Tubulin beta-6 chain (Beta-6... 0.03 Orthogroups_2024-Update
PSME_00027607-RA No alias (at5g62700 : 563.0) encodes tubulin beta-2/beta-3 chain;... 0.03 Orthogroups_2024-Update
Potri.002G021800 No alias tubulin beta-5 chain 0.03 Orthogroups_2024-Update
Potri.003G125400 No alias tubulin beta 8 0.02 Orthogroups_2024-Update
Potri.016G033200 No alias beta-6 tubulin 0.02 Orthogroups_2024-Update
Pp1s218_7V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Pp1s252_90V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Pp1s85_186V6 No alias beta chain 0.02 Orthogroups_2024-Update
Sopen06g011750 No alias Tubulin/FtsZ family, GTPase domain 0.03 Orthogroups_2024-Update
evm.model.tig00001067.14 No alias (p04690|tbb_chlre : 810.0) Tubulin beta-1/beta-2 chain -... 0.01 Orthogroups_2024-Update
evm.model.tig00001067.6 No alias (p04690|tbb_chlre : 752.0) Tubulin beta-1/beta-2 chain -... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 57 265
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 315 436
No external refs found!