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  5. Bradi2g53800

Bradi2g53800


Description : laccase 12


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g53800
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
105894 No alias laccase 17 0.01 Orthogroups_2024-Update
Bradi2g54680 No alias laccase 17 0.03 Orthogroups_2024-Update
GRMZM2G305526 No alias laccase 17 0.02 Orthogroups_2024-Update
GRMZM2G309594 No alias laccase 7 0.02 Orthogroups_2024-Update
Glyma.01G108200 No alias laccase 7 0.02 Orthogroups_2024-Update
Glyma.11G233400 No alias laccase 5 0.02 Orthogroups_2024-Update
Glyma.14G191500 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
LOC_Os05g38420 No alias laccase precursor protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_66348g0010 No alias (at5g05390 : 573.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00015369-RA No alias (at5g05390 : 671.0) putative laccase, a member of... 0.04 Orthogroups_2024-Update
PSME_00021512-RA No alias (at5g05390 : 645.0) putative laccase, a member of... 0.09 Orthogroups_2024-Update
PSME_00024478-RA No alias (at5g05390 : 702.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00044158-RA No alias (at2g40370 : 673.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00044448-RA No alias (at5g05390 : 808.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
Potri.007G023300 No alias laccase 11 0.02 Orthogroups_2024-Update
Potri.015G040700 No alias laccase 1 0.03 Orthogroups_2024-Update
Potri.016G112000 No alias Laccase/Diphenol oxidase family protein 0.02 Orthogroups_2024-Update
Seita.5G377800.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.02 Orthogroups_2024-Update
Seita.5G378200.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Sobic.005G005800.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 Orthogroups_2024-Update
Sobic.009G162800.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.04 Orthogroups_2024-Update
Solyc07g049460 No alias laccase 0.03 Orthogroups_2024-Update
Sopen02g029800 No alias Multicopper oxidase 0.03 Orthogroups_2024-Update
Sopen09g005780 No alias Multicopper oxidase 0.02 Orthogroups_2024-Update
Sopen10g034550 No alias Multicopper oxidase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR011707 Cu-oxidase_3 32 146
IPR011706 Cu-oxidase_2 416 548
IPR001117 Cu-oxidase 158 308
No external refs found!