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  5. Bradi2g53810

Bradi2g53810


Description : prenylated RAB acceptor 1.B4


Gene families : OG_42_0000375 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g53810

Target Alias Description ECC score Gene Family Method Actions
At1g55640 No alias PRA1 family protein G1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWD1] 0.02 Orthogroups_2024-Update
At3g13710 No alias PRA1 family protein F4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIC7] 0.02 Orthogroups_2024-Update
At5g56230 No alias PRA1 family protein G2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH16] 0.02 Orthogroups_2024-Update
Brara.A03238.1 No alias B-G-class Rab-GDF protein 0.02 Orthogroups_2024-Update
Brara.A03239.1 No alias B-G-class Rab-GDF protein 0.02 Orthogroups_2024-Update
Brara.E00691.1 No alias B-G-class Rab-GDF protein 0.01 Orthogroups_2024-Update
Brara.E02746.1 No alias B-G-class Rab-GDF protein 0.02 Orthogroups_2024-Update
Brara.F00022.1 No alias B-G-class Rab-GDF protein 0.01 Orthogroups_2024-Update
Brara.I04814.1 No alias B-G-class Rab-GDF protein 0.02 Orthogroups_2024-Update
GRMZM2G050890 No alias PRA1 (Prenylated rab acceptor) family protein 0.04 Orthogroups_2024-Update
GRMZM2G089783 No alias prenylated RAB acceptor 1.B4 0.02 Orthogroups_2024-Update
GRMZM2G147862 No alias prenylated RAB acceptor 1.E 0.01 Orthogroups_2024-Update
GRMZM2G322001 No alias PRA1 (Prenylated rab acceptor) family protein 0.03 Orthogroups_2024-Update
Glyma.01G002800 No alias PRA1 (Prenylated rab acceptor) family protein 0.01 Orthogroups_2024-Update
Glyma.07G011000 No alias PRA1 (Prenylated rab acceptor) family protein 0.01 Orthogroups_2024-Update
Glyma.10G163000 No alias prenylated RAB acceptor 1.E 0.04 Orthogroups_2024-Update
Glyma.18G207100 No alias prenylated RAB acceptor 1.B4 0.04 Orthogroups_2024-Update
Glyma.19G161800 No alias PRA1 (Prenylated rab acceptor) family protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G070360.1 No alias B-G-class Rab-GDF protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G047520.1 No alias B-G-class Rab-GDF protein 0.01 Orthogroups_2024-Update
LOC_Os01g61170 No alias prenylated rab acceptor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10434486g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_10435202g0010 No alias (at5g05380 : 204.0) prenylated RAB acceptor 1.B3... 0.01 Orthogroups_2024-Update
Potri.001G472300 No alias prenylated RAB acceptor 1.G2 0.02 Orthogroups_2024-Update
Potri.005G219100 No alias PRA1 (Prenylated rab acceptor) family protein 0.01 Orthogroups_2024-Update
Potri.010G183300 No alias prenylated RAB acceptor 1.B4 0.01 Orthogroups_2024-Update
Potri.019G124100 No alias prenylated RAB acceptor 1.B4 0.02 Orthogroups_2024-Update
Seita.3G113900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.3G207300.1 No alias B-G-class Rab-GDF protein 0.05 Orthogroups_2024-Update
Sobic.001G095300.1 No alias B-G-class Rab-GDF protein 0.03 Orthogroups_2024-Update
Sobic.001G259500.1 No alias B-G-class Rab-GDF protein 0.02 Orthogroups_2024-Update
Sobic.009G074100.2 No alias B-G-class Rab-GDF protein 0.14 Orthogroups_2024-Update
Solyc06g050570 No alias PRA1 family protein (AHRD V3.3 *** K4C5K1_SOLLC) 0.04 Orthogroups_2024-Update
Solyc09g066000 No alias PRA1 family protein (AHRD V3.3 *** K4CUM6_SOLLC) 0.03 Orthogroups_2024-Update
Solyc10g076360 No alias PRA1 family protein (AHRD V3.3 *** K4D1X8_SOLLC) 0.03 Orthogroups_2024-Update
Sopen09g032240 No alias PRA1 family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 57 199
No external refs found!