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  5. Bradi2g53890

Bradi2g53890


Description : Function unknown


Gene families : OG_42_0004521 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004521_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g53890
Cluster HCCA clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
At4g28590 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 Orthogroups_2024-Update
Brara.C01629.1 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.03 Orthogroups_2024-Update
Glyma.20G100000 No alias Thioredoxin superfamily protein 0.02 Orthogroups_2024-Update
Seita.5G367000.1 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.07 Orthogroups_2024-Update
Sobic.003G342700.1 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.03 Orthogroups_2024-Update
Sobic.009G138900.1 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.04 Orthogroups_2024-Update
Solyc02g079730 No alias Thioredoxin family protein, putative (AHRD V3.3 *** G7LIP5_MEDTR) 0.03 Orthogroups_2024-Update
Solyc04g071420 No alias Thioredoxin superfamily protein (AHRD V3.3 *** AT2G31840.2) 0.02 Orthogroups_2024-Update
Sopen04g027370 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!