Description : ribosomal protein S15A
Gene families : OG_42_0001161 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001161_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium release: Bradi2g54450 | |
Cluster | HCCA clusters: Cluster_132 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
228163 | No alias | Ribosomal protein S8 family protein | 0.15 | Orthogroups_2024-Update | |
At5g59850 | No alias | AT1G07770 protein [Source:UniProtKB/TrEMBL;Acc:B9DI04] | 0.08 | Orthogroups_2024-Update | |
Brara.B01062.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.17 | Orthogroups_2024-Update | |
Brara.C01067.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.27 | Orthogroups_2024-Update | |
Brara.F00468.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.22 | Orthogroups_2024-Update | |
Brara.J01354.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.1 | Orthogroups_2024-Update | |
Cre05.g234637 | No alias | Ribosomal protein S8 family protein | 0.21 | Orthogroups_2024-Update | |
GRMZM2G083497 | No alias | ribosomal protein S15A | 0.15 | Orthogroups_2024-Update | |
Glyma.01G240000 | No alias | ribosomal protein S15A | 0.03 | Orthogroups_2024-Update | |
Glyma.07G255500 | No alias | ribosomal protein S15A | 0.11 | Orthogroups_2024-Update | |
Glyma.11G003600 | No alias | ribosomal protein S15A | 0.09 | Orthogroups_2024-Update | |
Glyma.11G003700 | No alias | ribosomal protein S15A | 0.09 | Orthogroups_2024-Update | |
Glyma.15G102550 | No alias | ribosomal protein S15A | 0.09 | Orthogroups_2024-Update | |
Glyma.17G018600 | No alias | ribosomal protein S15A | 0.14 | Orthogroups_2024-Update | |
HORVU1Hr1G072060.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.11 | Orthogroups_2024-Update | |
HORVU3Hr1G086930.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.14 | Orthogroups_2024-Update | |
Kfl00864_0040 | kfl00864_0040_v1.1 | (at5g59850 : 230.0) Ribosomal protein S8 family protein;... | 0.07 | Orthogroups_2024-Update | |
LOC_Os02g27760 | No alias | 40S ribosomal protein S15a, putative, expressed | 0.04 | Orthogroups_2024-Update | |
LOC_Os07g10720 | No alias | 40S ribosomal protein S15a, putative, expressed | 0.07 | Orthogroups_2024-Update | |
MA_10427318g0020 | No alias | (at3g46040 : 214.0) Regulated by TCP20.; ribosomal... | 0.09 | Orthogroups_2024-Update | |
MA_57835g0010 | No alias | (at3g46040 : 223.0) Regulated by TCP20.; ribosomal... | 0.15 | Orthogroups_2024-Update | |
MA_82191g0010 | No alias | (at3g46040 : 223.0) Regulated by TCP20.; ribosomal... | 0.04 | Orthogroups_2024-Update | |
Mp8g06510.1 | No alias | component RPS15a of SSU proteome | 0.05 | Orthogroups_2024-Update | |
Mp8g13010.1 | No alias | component RPS15a of SSU proteome | 0.07 | Orthogroups_2024-Update | |
PSME_00001830-RA | No alias | (at5g59850 : 244.0) Ribosomal protein S8 family protein;... | 0.03 | Orthogroups_2024-Update | |
PSME_00015526-RA | No alias | (at5g59850 : 244.0) Ribosomal protein S8 family protein;... | 0.1 | Orthogroups_2024-Update | |
PSME_00039858-RA | No alias | (at5g59850 : 234.0) Ribosomal protein S8 family protein;... | 0.02 | Orthogroups_2024-Update | |
Potri.001G118100 | No alias | ribosomal protein S15A | 0.11 | Orthogroups_2024-Update | |
Potri.010G208700 | No alias | Ribosomal protein S8 family protein | 0.03 | Orthogroups_2024-Update | |
Pp1s115_101V6 | No alias | 40s ribosomal protein s15a | 0.11 | Orthogroups_2024-Update | |
Pp1s1_304V6 | No alias | 40s ribosomal protein s15a | 0.08 | Orthogroups_2024-Update | |
Pp1s426_18V6 | No alias | 40s ribosomal protein s15a | 0.12 | Orthogroups_2024-Update | |
Pp1s45_88V6 | No alias | 40s ribosomal protein s15a | 0.08 | Orthogroups_2024-Update | |
Pp1s61_209V6 | No alias | 40s ribosomal protein s15a | 0.05 | Orthogroups_2024-Update | |
Seita.2G319400.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.2 | Orthogroups_2024-Update | |
Seita.4G092300.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
Seita.5G374600.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.09 | Orthogroups_2024-Update | |
Seita.8G174900.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
Sobic.003G012700.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.18 | Orthogroups_2024-Update | |
Sobic.007G212600.1 | No alias | component *(uS8) of small ribosomal-subunit (SSU) proteome | 0.23 | Orthogroups_2024-Update | |
Sopen04g025860 | No alias | Ribosomal protein S8 | 0.16 | Orthogroups_2024-Update | |
Sopen04g026010 | No alias | Ribosomal protein S8 | 0.07 | Orthogroups_2024-Update | |
Sopen04g026020 | No alias | Ribosomal protein S8 | 0.26 | Orthogroups_2024-Update | |
evm.model.contig_2045.5 | No alias | (at5g59850 : 190.0) Ribosomal protein S8 family protein;... | 0.26 | Orthogroups_2024-Update | |
evm.model.tig00000158.110 | No alias | (q9at34|rs15a_dauca : 210.0) 40S ribosomal protein S15a... | 0.16 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0003747 | translation release factor activity | IEP | Predicted GO |
MF | GO:0003922 | GMP synthase (glutamine-hydrolyzing) activity | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0003937 | IMP cyclohydrolase activity | IEP | Predicted GO |
MF | GO:0004055 | argininosuccinate synthase activity | IEP | Predicted GO |
MF | GO:0004643 | phosphoribosylaminoimidazolecarboxamide formyltransferase activity | IEP | Predicted GO |
MF | GO:0004784 | superoxide dismutase activity | IEP | Predicted GO |
MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
CC | GO:0005759 | mitochondrial matrix | IEP | Predicted GO |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0006177 | GMP biosynthetic process | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006415 | translational termination | IEP | Predicted GO |
BP | GO:0006525 | arginine metabolic process | IEP | Predicted GO |
BP | GO:0006526 | arginine biosynthetic process | IEP | Predicted GO |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Predicted GO |
BP | GO:0006801 | superoxide metabolic process | IEP | Predicted GO |
MF | GO:0008079 | translation termination factor activity | IEP | Predicted GO |
MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009117 | nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009119 | ribonucleoside metabolic process | IEP | Predicted GO |
BP | GO:0009163 | nucleoside biosynthetic process | IEP | Predicted GO |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | Predicted GO |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Predicted GO |
MF | GO:0016462 | pyrophosphatase activity | IEP | Predicted GO |
MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Predicted GO |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Predicted GO |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Predicted GO |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
MF | GO:0016874 | ligase activity | IEP | Predicted GO |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Predicted GO |
MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Predicted GO |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
MF | GO:0019238 | cyclohydrolase activity | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
BP | GO:0022411 | cellular component disassembly | IEP | Predicted GO |
MF | GO:0031072 | heat shock protein binding | IEP | Predicted GO |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0032984 | protein-containing complex disassembly | IEP | Predicted GO |
BP | GO:0042278 | purine nucleoside metabolic process | IEP | Predicted GO |
BP | GO:0042451 | purine nucleoside biosynthetic process | IEP | Predicted GO |
BP | GO:0042455 | ribonucleoside biosynthetic process | IEP | Predicted GO |
CC | GO:0043233 | organelle lumen | IEP | Predicted GO |
BP | GO:0043624 | cellular protein complex disassembly | IEP | Predicted GO |
BP | GO:0046037 | GMP metabolic process | IEP | Predicted GO |
BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Predicted GO |
BP | GO:0046129 | purine ribonucleoside biosynthetic process | IEP | Predicted GO |
CC | GO:0070013 | intracellular organelle lumen | IEP | Predicted GO |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Predicted GO |
BP | GO:1901068 | guanosine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:1901070 | guanosine-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Predicted GO |
BP | GO:1901659 | glycosyl compound biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000630 | Ribosomal_S8 | 7 | 130 |
No external refs found! |