Bradi2g55190

Description : Pentatricopeptide repeat (PPR) superfamily protein

Gene families : OG_42_0010044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010044_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi2g55190
Cluster	HCCA clusters: Cluster_54

Target	Alias	Description	ECC score	Gene Family Method	Actions
Glyma.07G145700	No alias	Pentatricopeptide repeat (PPR) superfamily protein	0.02	Orthogroups_2024-Update
Sobic.003G359400.1	No alias	Unknown function	0.07	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	Predicted GO
MF	GO:0008270	zinc ion binding	IEP	Predicted GO
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Predicted GO
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	225	254
IPR002885	Pentatricopeptide_repeat	539	570
IPR002885	Pentatricopeptide_repeat	400	430
IPR002885	Pentatricopeptide_repeat	436	465
IPR002885	Pentatricopeptide_repeat	574	607
IPR002885	Pentatricopeptide_repeat	614	663
IPR002885	Pentatricopeptide_repeat	157	204
IPR002885	Pentatricopeptide_repeat	473	522
IPR002885	Pentatricopeptide_repeat	263	312
IPR002885	Pentatricopeptide_repeat	333	379

External Links

No external refs found!