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  5. Bradi2g56021

Bradi2g56021


Description : SNARE-like superfamily protein


Gene families : OG_42_0003934 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g56021
Cluster HCCA clusters: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Kfl00359_0100 kfl00359_0100_v1.1 (at5g58060 : 273.0) member of YKT6 Gene Family; YKT61;... 0.01 Orthogroups_2024-Update
evm.model.tig00020554.58 No alias (at5g58060 : 94.0) member of YKT6 Gene Family; YKT61;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0000814 ESCRT II complex IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0019905 syntaxin binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR010908 Longin_dom 60 128
IPR001388 Synaptobrevin 151 207
No external refs found!