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  5. Bradi2g56786

Bradi2g56786


Description : catalytic LigB subunit of aromatic ring-opening dioxygenase family


Gene families : OG_42_0003069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g56786
Cluster HCCA clusters: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G156900 No alias catalytic LigB subunit of aromatic ring-opening... 0.03 Orthogroups_2024-Update
MA_10430803g0010 No alias (at4g15093 : 333.0) catalytic LigB subunit of aromatic... 0.03 Orthogroups_2024-Update
Sobic.003G376100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc11g072550 No alias 4,5-dioxygenase-like protein (AHRD V3.3 *** A0A0G2UQT9_9CARY) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006725 cellular aromatic compound metabolic process IEA InterProScan predictions
MF GO:0008198 ferrous iron binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
InterPro domains Description Start Stop
IPR004183 Xdiol_dOase_suB 46 304
No external refs found!