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  5. Bradi2g56820

Bradi2g56820


Description : Plant invertase/pectin methylesterase inhibitor superfamily


Gene families : OG_42_0002014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g56820
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
PSME_00008322-RA No alias (at5g09760 : 485.0) Plant invertase/pectin... 0.04 Orthogroups_2024-Update
Sopen11g001730 No alias Pectinesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 233 539
IPR006501 Pectinesterase_inhib_dom 56 176
No external refs found!