Bradi2g57000

Description : K-box region and MADS-box transcription factor family protein

Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi2g57000
Cluster	HCCA clusters: Cluster_145

Target	Alias	Description	ECC score	Gene Family Method
A4A49_14436	No alias	agamous-like mads-box protein agl11	0.03	Orthogroups_2024-Update
A4A49_16643	No alias	agamous-like mads-box protein agl11	0.04	Orthogroups_2024-Update
A4A49_20590	No alias	mads-box transcription factor 27	0.02	Orthogroups_2024-Update
A4A49_22632	No alias	floral homeotic protein agamous	0.01	Orthogroups_2024-Update
A4A49_63038	No alias	agamous-like mads-box protein agl19	0.01	Orthogroups_2024-Update
At1g26310	No alias	Transcription factor CAULIFLOWER...	0.03	Orthogroups_2024-Update
At2g45660	No alias	SOC1 [Source:UniProtKB/TrEMBL;Acc:A0A178VZL4]	0.02	Orthogroups_2024-Update
At4g09960	No alias	K-box region and MADS-box transcription factor family...	0.02	Orthogroups_2024-Update
At4g11880	No alias	Agamous-like MADS-box protein AGL14...	0.02	Orthogroups_2024-Update
At5g13790	No alias	AGL15 [Source:UniProtKB/TrEMBL;Acc:A0A178UBU5]	0.02	Orthogroups_2024-Update
Bradi1g08340	No alias	K-box region and MADS-box transcription factor family protein	0.08	Orthogroups_2024-Update
Bradi2g59119	No alias	AGAMOUS-like 14	0.02	Orthogroups_2024-Update
Brara.D00221.1	No alias	MADS/AGL-type transcription factor	0.01	Orthogroups_2024-Update
Brara.G01817.1	No alias	MADS/AGL-type transcription factor	0.04	Orthogroups_2024-Update
GRMZM2G010669	No alias	K-box region and MADS-box transcription factor family protein	0.01	Orthogroups_2024-Update
GRMZM2G133568	No alias	AGAMOUS-like 16	0.05	Orthogroups_2024-Update
Glyma.05G050700	No alias	AGAMOUS-like 19	0.02	Orthogroups_2024-Update
Glyma.07G081300	No alias	AGAMOUS-like 6	0.03	Orthogroups_2024-Update
Glyma.08G105500	No alias	K-box region and MADS-box transcription factor family protein	0.07	Orthogroups_2024-Update
Glyma.08G282500	No alias	AGAMOUS-like 29	0.01	Orthogroups_2024-Update
LOC_Os02g36924	No alias	OsMADS27 - MADS-box family gene with MIKCc type-box, expressed	0.01	Orthogroups_2024-Update
PSME_00042195-RA	No alias	(at2g45660 : 177.0) Controls flowering and is required...	0.02	Orthogroups_2024-Update
Potri.001G112400	No alias	AGAMOUS-like 19	0.02	Orthogroups_2024-Update
Potri.001G284301	No alias	AGAMOUS-like 21	0.03	Orthogroups_2024-Update
Potri.004G064300	No alias	K-box region and MADS-box transcription factor family protein	0.01	Orthogroups_2024-Update
Potri.008G098500	No alias	K-box region and MADS-box transcription factor family protein	0.02	Orthogroups_2024-Update
Potri.T101400	No alias	AGAMOUS-like 62	0.02	Orthogroups_2024-Update
Seita.1G273400.1	No alias	regulatory protein *(SEPALLATA) of floral meristem...	0.01	Orthogroups_2024-Update
Seita.3G073000.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
Seita.6G156800.1	No alias	MADS/AGL-type transcription factor	0.01	Orthogroups_2024-Update
Solyc06g059970	No alias	TPI	0.02	Orthogroups_2024-Update
Sopen05g011300	No alias	SRF-type transcription factor (DNA-binding and...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	10	57
IPR002487	TF_Kbox	82	164

External Links

No external refs found!

Bradi2g57000

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation