Description : transporter associated with antigen processing protein 1
Gene families : OG_42_0005572 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005572_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium release: Bradi2g58380 | |
Cluster | HCCA clusters: Cluster_219 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
LOC_Os01g68330 | No alias | antigen peptide transporter-like 1, chloroplast... | 0.04 | Orthogroups_2024-Update | |
Sobic.003G398100.1 | No alias | subfamily ABCB transporter | 0.03 | Orthogroups_2024-Update | |
evm.model.tig00000711.45 | No alias | (at5g39040 : 146.0) Encodes a member of TAP subfamily of... | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
CC | GO:0016021 | integral component of membrane | IEA | InterProScan predictions |
MF | GO:0016887 | ATPase activity | IEA | InterProScan predictions |
MF | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEA | InterProScan predictions |
BP | GO:0055085 | transmembrane transport | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004055 | argininosuccinate synthase activity | IEP | Predicted GO |
MF | GO:0004527 | exonuclease activity | IEP | Predicted GO |
MF | GO:0004529 | exodeoxyribonuclease activity | IEP | Predicted GO |
MF | GO:0004536 | deoxyribonuclease activity | IEP | Predicted GO |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Predicted GO |
MF | GO:0005516 | calmodulin binding | IEP | Predicted GO |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
BP | GO:0006525 | arginine metabolic process | IEP | Predicted GO |
BP | GO:0006526 | arginine biosynthetic process | IEP | Predicted GO |
BP | GO:0008152 | metabolic process | IEP | Predicted GO |
MF | GO:0008297 | single-stranded DNA exodeoxyribonuclease activity | IEP | Predicted GO |
MF | GO:0008409 | 5'-3' exonuclease activity | IEP | Predicted GO |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Predicted GO |
MF | GO:0010333 | terpene synthase activity | IEP | Predicted GO |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Predicted GO |
MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | Predicted GO |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Predicted GO |
MF | GO:0016895 | exodeoxyribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0019842 | vitamin binding | IEP | Predicted GO |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Predicted GO |
MF | GO:0035312 | 5'-3' exodeoxyribonuclease activity | IEP | Predicted GO |
MF | GO:0045145 | single-stranded DNA 5'-3' exodeoxyribonuclease activity | IEP | Predicted GO |
MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
MF | GO:0050664 | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | IEP | Predicted GO |
MF | GO:0070279 | vitamin B6 binding | IEP | Predicted GO |
MF | GO:0070567 | cytidylyltransferase activity | IEP | Predicted GO |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Predicted GO |
No external refs found! |