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  5. Bradi2g58616

Bradi2g58616


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0004826 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004826_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g58616
Cluster HCCA clusters: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
MA_76964g0020 No alias (at3g04240 : 1233.0) Has O-linked N-acetyl glucosamine... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR001440 TPR_1 395 424
IPR001440 TPR_1 257 289
IPR029489 OGT/SEC/SPY_C 591 744
IPR029489 OGT/SEC/SPY_C 752 951
IPR019734 TPR_repeat 222 254
No external refs found!