Bradi2g59210

Description : ribosomal protein large subunit 27

Gene families : OG_42_0002035 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002035_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi2g59210
Cluster	HCCA clusters: Cluster_160

Target	Alias	Description	ECC score	Gene Family Method
159042	No alias	ribosomal protein large subunit 27	0.06	Orthogroups_2024-Update
A4A49_35915	No alias	50s ribosomal protein l27, chloroplastic	0.06	Orthogroups_2024-Update
Cre06.g300800	No alias	ribosomal protein large subunit 27	0.1	Orthogroups_2024-Update
Glyma.11G151300	No alias	ribosomal protein large subunit 27	0.05	Orthogroups_2024-Update
HORVU3Hr1G095330.1	No alias	component *(bL27c) of large plastid ribosomal-subunit proteome	0.09	Orthogroups_2024-Update
Kfl00181_0180	kfl00181_0180_v1.1	(at2g16930 : 127.0) Ribosomal protein L27 family...	0.03	Orthogroups_2024-Update
Kfl00287_0170	kfl00287_0170_v1.1	(p30155\|rk27_tobac : 140.0) 50S ribosomal protein L27,...	0.05	Orthogroups_2024-Update
Mp5g06170.1	No alias	component psRPL27 of large ribosomal subunit proteome	0.02	Orthogroups_2024-Update
Potri.001G329500	No alias	ribosomal protein large subunit 27	0.04	Orthogroups_2024-Update
Pp1s167_18V6	No alias	ribosomal protein l27	0.04	Orthogroups_2024-Update
Pp1s19_202V6	No alias	ribosomal protein l27	0.08	Orthogroups_2024-Update
Seita.5G433600.1	No alias	component *(bL27c) of large plastid ribosomal-subunit proteome	0.04	Orthogroups_2024-Update
Sobic.003G408000.2	No alias	component *(bL27c) of large plastid ribosomal-subunit proteome	0.06	Orthogroups_2024-Update
Solyc11g068820	No alias	50S ribosomal protein L27	0.05	Orthogroups_2024-Update
Sopen11g027540	No alias	Ribosomal L27 protein	0.08	Orthogroups_2024-Update
evm.model.tig00021428.4	No alias	(at2g16930 : 106.0) Ribosomal protein L27 family...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
MF	GO:0008168	methyltransferase activity	IEP	Predicted GO
MF	GO:0008171	O-methyltransferase activity	IEP	Predicted GO
CC	GO:0009507	chloroplast	IEP	Predicted GO
CC	GO:0009536	plastid	IEP	Predicted GO
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Predicted GO
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001684	Ribosomal_L27	49	128

External Links

No external refs found!

Bradi2g59210

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation