Description : ribosomal protein large subunit 27
Gene families : OG_42_0002035 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002035_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium release: Bradi2g59210 | |
Cluster | HCCA clusters: Cluster_160 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
159042 | No alias | ribosomal protein large subunit 27 | 0.06 | Orthogroups_2024-Update | |
A4A49_35915 | No alias | 50s ribosomal protein l27, chloroplastic | 0.06 | Orthogroups_2024-Update | |
Cre06.g300800 | No alias | ribosomal protein large subunit 27 | 0.1 | Orthogroups_2024-Update | |
Glyma.11G151300 | No alias | ribosomal protein large subunit 27 | 0.05 | Orthogroups_2024-Update | |
HORVU3Hr1G095330.1 | No alias | component *(bL27c) of large plastid ribosomal-subunit proteome | 0.09 | Orthogroups_2024-Update | |
Kfl00181_0180 | kfl00181_0180_v1.1 | (at2g16930 : 127.0) Ribosomal protein L27 family... | 0.03 | Orthogroups_2024-Update | |
Kfl00287_0170 | kfl00287_0170_v1.1 | (p30155|rk27_tobac : 140.0) 50S ribosomal protein L27,... | 0.05 | Orthogroups_2024-Update | |
Mp5g06170.1 | No alias | component psRPL27 of large ribosomal subunit proteome | 0.02 | Orthogroups_2024-Update | |
Potri.001G329500 | No alias | ribosomal protein large subunit 27 | 0.04 | Orthogroups_2024-Update | |
Pp1s167_18V6 | No alias | ribosomal protein l27 | 0.04 | Orthogroups_2024-Update | |
Pp1s19_202V6 | No alias | ribosomal protein l27 | 0.08 | Orthogroups_2024-Update | |
Seita.5G433600.1 | No alias | component *(bL27c) of large plastid ribosomal-subunit proteome | 0.04 | Orthogroups_2024-Update | |
Sobic.003G408000.2 | No alias | component *(bL27c) of large plastid ribosomal-subunit proteome | 0.06 | Orthogroups_2024-Update | |
Solyc11g068820 | No alias | 50S ribosomal protein L27 | 0.05 | Orthogroups_2024-Update | |
Sopen11g027540 | No alias | Ribosomal L27 protein | 0.08 | Orthogroups_2024-Update | |
evm.model.tig00021428.4 | No alias | (at2g16930 : 106.0) Ribosomal protein L27 family... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005622 | intracellular | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
MF | GO:0008171 | O-methyltransferase activity | IEP | Predicted GO |
CC | GO:0009507 | chloroplast | IEP | Predicted GO |
CC | GO:0009536 | plastid | IEP | Predicted GO |
MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Predicted GO |
MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Predicted GO |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001684 | Ribosomal_L27 | 49 | 128 |
No external refs found! |