1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi2g60554

Bradi2g60554


Description : AP2/B3-like transcriptional factor family protein


Gene families : OG_42_0000707 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000707_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g60554
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G130016 No alias RING/FYVE/PHD zinc finger superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os03g42410 No alias B3 DNA binding domain containing protein 0.02 Orthogroups_2024-Update
Seita.3G372500.1 No alias REM-type transcription factor 0.05 Orthogroups_2024-Update
Seita.7G295000.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 535 633
IPR003340 B3_DNA-bd 86 166
No external refs found!