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  5. Bradi2g60810

Bradi2g60810


Description : Early-responsive to dehydration stress protein (ERD4)


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g60810
Cluster HCCA clusters: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
Brara.C02960.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Kfl00071_0140 kfl00071_0140_v1.1 (at4g04340 : 511.0) ERD (early-responsive to dehydration... 0.03 Orthogroups_2024-Update
Mp8g07950.1 No alias calcium-permeable channel (OSCA) 0.02 Orthogroups_2024-Update
Seita.9G110200.1 No alias calcium-permeable channel *(OSCA) 0.04 Orthogroups_2024-Update
Sobic.002G034500.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Sobic.008G187100.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Sopen02g011660 No alias Domain of unknown function DUF221 0.03 Orthogroups_2024-Update
evm.model.tig00000227.25 No alias (at1g30360 : 154.0) early-responsive to dehydration 4... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
InterPro domains Description Start Stop
IPR027815 PHM7_cyt 184 339
IPR003864 RSN1_7TM 351 616
IPR032880 Csc1_N 6 163
No external refs found!