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  5. Sopen07g001130

Sopen07g001130


Description : MCM2/3/5 family


Gene families : OG_42_0006778 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006778_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g001130
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
At2g07690 No alias DNA replication licensing factor MCM5... 0.06 Orthogroups_2024-Update
Bradi3g54190 No alias Minichromosome maintenance (MCM2/3/5) family protein 0.05 Orthogroups_2024-Update
Brara.C04051.1 No alias component *(MCM5) of MCM replicative DNA helicase complex 0.09 Orthogroups_2024-Update
GRMZM2G450055 No alias Minichromosome maintenance (MCM2/3/5) family protein 0.02 Orthogroups_2024-Update
Glyma.13G156400 No alias Minichromosome maintenance (MCM2/3/5) family protein 0.11 Orthogroups_2024-Update
Glyma.17G104000 No alias Minichromosome maintenance (MCM2/3/5) family protein 0.12 Orthogroups_2024-Update
Kfl00184_0010 kfl00184_0010_v1.1 (at2g07690 : 812.0) Member of the minichromosome... 0.05 Orthogroups_2024-Update
MA_10426777g0010 No alias (at2g07690 : 693.0) Member of the minichromosome... 0.05 Orthogroups_2024-Update
Seita.1G352100.1 No alias component *(MCM5) of MCM replicative DNA helicase complex 0.15 Orthogroups_2024-Update
Sobic.004G331600.1 No alias component *(MCM5) of MCM replicative DNA helicase complex 0.12 Orthogroups_2024-Update
Solyc07g005020 No alias DNA helicase (AHRD V3.3 *** K4CAX4_SOLLC) 0.17 Orthogroups_2024-Update
evm.model.contig_3537.4 No alias (at2g07690 : 633.0) Member of the minichromosome... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006270 DNA replication initiation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR027925 MCM_N 39 132
IPR001208 MCM_dom 323 545
IPR033762 MCM_OB 144 279
No external refs found!