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  5. Bradi2g62180

Bradi2g62180


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g62180
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
101239 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
101455 No alias mitochondrial editing factor 22 0.02 Orthogroups_2024-Update
105356 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
At4g02750 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Orthogroups_2024-Update
At5g52850 No alias Pentatricopeptide repeat-containing protein At5g52850,... 0.03 Orthogroups_2024-Update
Brara.E03491.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G019689 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G020008 No alias mitochondrial RNAediting factor 1 0.03 Orthogroups_2024-Update
GRMZM2G031588 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G040947 No alias pentatricopeptide (PPR) repeat-containing protein 0.04 Orthogroups_2024-Update
GRMZM2G060337 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G073017 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G098869 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G099875 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G103078 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G144071 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G154743 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G158839 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G177715 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G331779 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G430710 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G440349 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 Orthogroups_2024-Update
GRMZM2G456114 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G474929 No alias mitochondrial editing factor 21 0.03 Orthogroups_2024-Update
GRMZM5G862936 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G159100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G006900 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G043900 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G078800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.04G129100 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.05G244300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.08G141600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G080630.6 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g60430 No alias pentatricopeptide repeat-containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g27790 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g30760 No alias pentatricopeptide, putative, expressed 0.04 Orthogroups_2024-Update
MA_138676g0010 No alias (at3g49170 : 755.0) embryo defective 2261 (EMB2261);... 0.03 Orthogroups_2024-Update
MA_50118g0010 No alias (at3g03580 : 671.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00004138-RA No alias (at1g11290 : 633.0) Pentatricopeptide Repeat Protein... 0.02 Orthogroups_2024-Update
PSME_00016247-RA No alias (at3g12770 : 627.0) Encodes a pentatricopeptide repeat... 0.02 Orthogroups_2024-Update
PSME_00016653-RA No alias (at3g02010 : 685.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00028519-RA No alias (at2g22070 : 606.0) pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
PSME_00036639-RA No alias (at1g11290 : 691.0) Pentatricopeptide Repeat Protein... 0.02 Orthogroups_2024-Update
PSME_00056153-RA No alias (at2g13600 : 519.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00056168-RA No alias (at3g61170 : 686.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00056663-RA No alias (at3g13770 : 545.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00056843-RA No alias (at4g02750 : 457.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
Potri.017G137200 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.T137000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Seita.1G076000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.1G263300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.1G290500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G001800.1 No alias RNA editing factor *(ELI1) 0.02 Orthogroups_2024-Update
Seita.3G137300.1 No alias RNA editing factor *(ECB2/VAC1) 0.02 Orthogroups_2024-Update
Seita.3G224300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G168900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G225800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G124400.1 No alias RNA editing factor *(OTP81) 0.04 Orthogroups_2024-Update
Seita.5G176900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G326600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.5G357300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G360300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G385400.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.6G130100.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.7G164600.1 No alias RNA editing factor *(MEF12) 0.03 Orthogroups_2024-Update
Seita.7G277600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G017200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G339400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G473200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G477500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G514800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G009400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G069300.2 No alias RNA editing factor *(DEK36) 0.07 Orthogroups_2024-Update
Sobic.001G149100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G151300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G212200.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.001G312700.1 No alias RNA editing factor *(MEF25) 0.08 Orthogroups_2024-Update
Sobic.001G347100.2 No alias Unknown function 0.08 Orthogroups_2024-Update
Sobic.001G436600.3 No alias Unknown function 0.08 Orthogroups_2024-Update
Sobic.001G478900.2 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.002G084400.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.002G111700.6 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G172500.3 No alias Unknown function 0.08 Orthogroups_2024-Update
Sobic.002G240900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G292300.2 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.002G358900.3 No alias RNA editing factor *(OTP90) 0.03 Orthogroups_2024-Update
Sobic.002G384800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G389200.2 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.003G047400.1 No alias RNA editing factor *(OTP81) 0.05 Orthogroups_2024-Update
Sobic.003G119100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G237100.2 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.003G239000.1 No alias RNA editing factor *(MEF1) 0.04 Orthogroups_2024-Update
Sobic.003G277100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G398900.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.004G051600.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.004G053100.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.004G141600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G199400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G217900.2 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.004G312000.1 No alias RNA editing factor *(CLB19) 0.03 Orthogroups_2024-Update
Sobic.005G210700.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.006G069100.3 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.006G146400.4 No alias RNA editing factor *(MEF12) 0.04 Orthogroups_2024-Update
Sobic.007G006800.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G208400.1 No alias RNA editing factor *(REME1) 0.04 Orthogroups_2024-Update
Sobic.008G009000.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.008G041000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.008G066900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.009G136200.1 No alias RNA editing factor *(MEF32) 0.05 Orthogroups_2024-Update
Sobic.009G155400.3 No alias Unknown function 0.08 Orthogroups_2024-Update
Sobic.009G238700.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.009G241200.3 No alias RNA editing factor *(ECB2/VAC1) 0.04 Orthogroups_2024-Update
Sobic.010G066900.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Sobic.010G067000.1 No alias RNA editing factor *(MEF29) 0.04 Orthogroups_2024-Update
Sobic.010G189200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G232700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc01g006920 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc01g081290 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc01g100800 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.02 Orthogroups_2024-Update
Solyc06g084580 No alias Pentatricopeptide repeat-containing protein family (AHRD... 0.03 Orthogroups_2024-Update
Solyc07g006990 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc09g059580 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc10g008590 No alias Pentatricopeptide repeat-containing protein, putative... 0.02 Orthogroups_2024-Update
Sopen01g006160 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen02g025050 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen03g003770 No alias PPR repeat family 0.04 Orthogroups_2024-Update
Sopen03g011150 No alias PPR repeat 0.03 Orthogroups_2024-Update
Sopen03g028590 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen05g018650 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen07g022420 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen10g004410 No alias PPR repeat family 0.04 Orthogroups_2024-Update
Sopen11g001900 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen11g024970 No alias PPR repeat family 0.04 Orthogroups_2024-Update
Sopen11g026910 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 78 100
IPR002885 Pentatricopeptide_repeat 282 311
IPR002885 Pentatricopeptide_repeat 456 481
IPR002885 Pentatricopeptide_repeat 254 280
IPR002885 Pentatricopeptide_repeat 355 376
IPR002885 Pentatricopeptide_repeat 557 578
IPR002885 Pentatricopeptide_repeat 181 211
IPR002885 Pentatricopeptide_repeat 153 174
IPR002885 Pentatricopeptide_repeat 50 76
IPR002885 Pentatricopeptide_repeat 658 681
IPR002885 Pentatricopeptide_repeat 482 525
IPR002885 Pentatricopeptide_repeat 381 424
IPR002885 Pentatricopeptide_repeat 582 630
No external refs found!