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  5. Solyc02g077240

Solyc02g077240


Description : Pyruvate decarboxylase (AHRD V3.3 *** Q1I1D9_CITSI)


Gene families : OG_42_0000963 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000963_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g077240
Cluster HCCA clusters: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
At5g01320 No alias Pyruvate decarboxylase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M040] 0.03 Orthogroups_2024-Update
Glyma.08G176600 No alias Thiamine pyrophosphate dependent pyruvate decarboxylase... 0.03 Orthogroups_2024-Update
HORVU3Hr1G018550.1 No alias pyruvate decarboxylase *(PDC) & EC_4.1 carbon-carbon lyase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0030976 thiamine pyrophosphate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR012000 Thiamin_PyroP_enz_cen_dom 264 381
IPR011766 TPP_enzyme-bd_C 474 599
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 67 232
No external refs found!