Bradi2g62660

Description : GATA transcription factor 17

Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi2g62660

Target	Alias	Description	ECC score	Gene Family Method
A4A49_09786	No alias	gata transcription factor 2	0.01	Orthogroups_2024-Update
A4A49_17145	No alias	gata transcription factor 8	0.01	Orthogroups_2024-Update
A4A49_18609	No alias	gata transcription factor 9	0.01	Orthogroups_2024-Update
At3g24050	No alias	GATA transcription factor 1...	0.01	Orthogroups_2024-Update
Bradi4g41570	No alias	GATA transcription factor 9	0.02	Orthogroups_2024-Update
Brara.C03804.1	No alias	transcription factor *(A/B-GATA)	0.01	Orthogroups_2024-Update
Brara.C04334.1	No alias	transcription factor *(A/B-GATA)	0.01	Orthogroups_2024-Update
Brara.G01891.1	No alias	transcription factor *(A/B-GATA)	0.02	Orthogroups_2024-Update
Cre01.g025050	No alias	GATA transcription factor 9	0.01	Orthogroups_2024-Update
GRMZM2G031983	No alias	GATA type zinc finger transcription factor family protein	0.02	Orthogroups_2024-Update
GRMZM2G054615	No alias	GATA transcription factor 5	0.03	Orthogroups_2024-Update
GRMZM2G101058	No alias	GATA transcription factor 4	0.05	Orthogroups_2024-Update
GRMZM2G140669	No alias	GATA transcription factor 7	0.01	Orthogroups_2024-Update
GRMZM2G379005	No alias	GATA transcription factor 12	0.02	Orthogroups_2024-Update
Glyma.02G056600	No alias	GATA type zinc finger transcription factor family protein	0.04	Orthogroups_2024-Update
Glyma.03G118100	No alias	GATA transcription factor 2	0.03	Orthogroups_2024-Update
Glyma.04G051300	No alias	cytokinin-responsive gata factor 1	0.02	Orthogroups_2024-Update
Glyma.04G084900	No alias	GATA transcription factor 9	0.03	Orthogroups_2024-Update
Glyma.08G187300	No alias	GATA transcription factor 29	0.01	Orthogroups_2024-Update
Glyma.08G202100	No alias	GATA transcription factor 9	0.03	Orthogroups_2024-Update
HORVU1Hr1G076000.1	No alias	transcription factor *(A/B-GATA)	0.02	Orthogroups_2024-Update
MA_10434815g0010	No alias	(at2g45050 : 142.0) Encodes a member of the GATA factor...	0.01	Orthogroups_2024-Update
MA_10436047g0010	No alias	(at3g16870 : 80.9) Encodes a member of the GATA factor...	0.04	Orthogroups_2024-Update
PSME_00026073-RA	No alias	(at5g66320 : 163.0) Encodes GATA transcription factor...	0.01	Orthogroups_2024-Update
PSME_00050219-RA	No alias	no hits & (original description: no original description)	0.01	Orthogroups_2024-Update
PSME_00050760-RA	No alias	no hits & (original description: no original description)	0.01	Orthogroups_2024-Update
PSME_00054096-RA	No alias	(at5g25830 : 199.0) Encodes a member of the GATA factor...	0.08	Orthogroups_2024-Update
Potri.001G188500	No alias	GATA transcription factor 9	0.02	Orthogroups_2024-Update
Potri.003G174800	No alias	GATA transcription factor 1	0.02	Orthogroups_2024-Update
Potri.003G213300	No alias	GATA transcription factor 29	0.02	Orthogroups_2024-Update
Potri.004G211800	No alias	GATA transcription factor 11	0.02	Orthogroups_2024-Update
Potri.005G020500	No alias	GATA transcription factor 16	0.02	Orthogroups_2024-Update
Potri.006G229200	No alias	GATA type zinc finger transcription factor family protein	0.02	Orthogroups_2024-Update
Potri.010G223300	No alias	GATA transcription factor 4	0.02	Orthogroups_2024-Update
Potri.013G059600	No alias	GATA transcription factor 12	0.02	Orthogroups_2024-Update
Seita.7G183600.1	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
Sobic.006G162800.1	No alias	transcription factor *(A/B-GATA)	0.01	Orthogroups_2024-Update
Sobic.009G202000.1	No alias	transcription factor *(A/B-GATA)	0.01	Orthogroups_2024-Update
Solyc10g018560	No alias	GATA transcription factor (AHRD V3.3 *** K4CYY0_SOLLC)	0.01	Orthogroups_2024-Update
Solyc11g069510	No alias	GATA transcription factor (AHRD V3.3 *** V7C3K3_PHAVU)	0.02	Orthogroups_2024-Update
Sopen02g013790	No alias	GATA zinc finger	0.02	Orthogroups_2024-Update
Sopen02g029890	No alias	GATA zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009308	amine metabolic process	IEP	Predicted GO
BP	GO:0009690	cytokinin metabolic process	IEP	Predicted GO
BP	GO:0010817	regulation of hormone levels	IEP	Predicted GO
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predicted GO
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Predicted GO
BP	GO:0034754	cellular hormone metabolic process	IEP	Predicted GO
BP	GO:0042445	hormone metabolic process	IEP	Predicted GO
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predicted GO
MF	GO:0050662	coenzyme binding	IEP	Predicted GO
BP	GO:0065008	regulation of biological quality	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	23	57

External Links

No external refs found!

Bradi2g62660

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation