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  5. Bradi3g00580

Bradi3g00580


Description : F-box and associated interaction domains-containing protein


Gene families : OG_42_0000127 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g00580
Cluster HCCA clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
Bradi1g58711 No alias Function unknown 0.06 Orthogroups_2024-Update
Bradi2g01185 No alias Function unknown 0.05 Orthogroups_2024-Update
HORVU2Hr1G062360.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G087440.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G074600.1 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU5Hr1G105650.26 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G090600.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 20 59
No external refs found!