Bradi3g00773

Description : Mitochondrial transcription termination factor family protein

Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi3g00773
Cluster	HCCA clusters: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
HORVU1Hr1G061360.1	No alias	mTERF-type transcription factor	0.05	Orthogroups_2024-Update
LOC_Os05g33460	No alias	mTERF domain containing protein, expressed	0.04	Orthogroups_2024-Update
MA_209070g0010	No alias	(at5g64950 : 107.0) Mitochondrial transcription...	0.04	Orthogroups_2024-Update
MA_493420g0010	No alias	(at5g64950 : 115.0) Mitochondrial transcription...	0.04	Orthogroups_2024-Update
MA_5255515g0010	No alias	(at5g64950 : 84.0) Mitochondrial transcription...	0.04	Orthogroups_2024-Update
PSME_00009256-RA	No alias	(at1g62110 : 82.4) Mitochondrial transcription...	0.07	Orthogroups_2024-Update
Seita.4G094500.1	No alias	mTERF-type transcription factor	0.08	Orthogroups_2024-Update
Seita.4G096000.1	No alias	mTERF-type transcription factor	0.07	Orthogroups_2024-Update
Seita.5G100700.1	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
Seita.6G130600.1	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G199700.1	No alias	mTERF-type transcription factor	0.06	Orthogroups_2024-Update
Sobic.004G235300.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
Solyc04g072540	No alias	Mitochondrial transcription termination factor family...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Predicted GO
MF	GO:0003682	chromatin binding	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
MF	GO:0030247	polysaccharide binding	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
MF	GO:0043531	ADP binding	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003690	MTERF	231	321

External Links

No external refs found!

Bradi3g00773

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation