Sopen07g001670

Description : APO RNA-binding

Gene families : OG_42_0001137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001137_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen07g001670
Cluster	HCCA clusters: Cluster_57

Target	Alias	Description	ECC score	Gene Family Method
Glyma.09G086100	No alias	Arabidopsis thaliana protein of unknown function (DUF794)	0.03	Orthogroups_2024-Update
MA_136047g0010	No alias	(at5g57930 : 407.0) ACCUMULATION OF PHOTOSYSTEM ONE 2;...	0.03	Orthogroups_2024-Update
Solyc07g005570	No alias	APO protein 2 (AHRD V3.3 *** W9S368_9ROSA)	0.11	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR023342	APO_dom	298	414
IPR023342	APO_dom	69	264

External Links

No external refs found!