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  5. Bradi3g02670

Bradi3g02670


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0007340 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007340_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g02670
Cluster HCCA clusters: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
PSME_00025720-RA No alias (at1g71210 : 465.0) Pentatricopeptide repeat (PPR)... 0.05 Orthogroups_2024-Update
PSME_00031442-RA No alias (at1g71210 : 394.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
Seita.1G101600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G025700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen07g021630 No alias PPR repeat family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 811 859
IPR002885 Pentatricopeptide_repeat 595 625
IPR002885 Pentatricopeptide_repeat 665 694
IPR002885 Pentatricopeptide_repeat 187 212
IPR002885 Pentatricopeptide_repeat 453 476
IPR002885 Pentatricopeptide_repeat 418 441
No external refs found!