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  5. Sopen07g001700

Sopen07g001700


Description : Ion transport protein


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g001700
Cluster HCCA clusters: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Glyma.17G073500 No alias cyclic nucleotide gated channel 5 0.02 Orthogroups_2024-Update
Glyma.19G255300 No alias cyclic nucleotide gated channel 1 0.02 Orthogroups_2024-Update
HORVU1Hr1G066020.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Potri.018G009200 No alias cyclic nucleotide-gated channel 14 0.03 Orthogroups_2024-Update
Seita.1G336400.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Seita.4G168400.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Solyc12g010010 No alias Cyclic nucleotide-gated ion channel, putative (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 531 618
IPR005821 Ion_trans_dom 109 433
No external refs found!