1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi3g03317

Bradi3g03317


Description : Cleavage and polyadenylation specificity factor (CPSF) A subunit protein


Gene families : OG_42_0004635 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004635_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g03317
Cluster HCCA clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cre08.g372800 No alias Cleavage and polyadenylation specificity factor (CPSF) A... 0.02 Orthogroups_2024-Update
LOC_Os02g04480 No alias cleavage and polyadenylation specificity factor,... 0.02 Orthogroups_2024-Update
PSME_00044892-RA No alias (at3g55200 : 1672.0) Cleavage and polyadenylation... 0.04 Orthogroups_2024-Update
Seita.9G555800.1 No alias component *(SF3B3) of splicing factor 3B complex 0.03 Orthogroups_2024-Update
evm.model.contig_2156.1 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004871 Cleavage/polyA-sp_fac_asu_C 875 1194
No external refs found!