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  5. Bradi3g03570

Bradi3g03570


Description : RNA helicase family protein


Gene families : OG_42_0000210 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000210_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g03570
Cluster HCCA clusters: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
At2g35340 No alias Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.03 Orthogroups_2024-Update
At3g26560 No alias Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.02 Orthogroups_2024-Update
Cre08.g358563 No alias ATP-dependent RNA helicase, putative 0.01 Orthogroups_2024-Update
Glyma.06G201700 No alias RNA helicase family protein 0.02 Orthogroups_2024-Update
Glyma.13G342400 No alias RNA helicase family protein 0.02 Orthogroups_2024-Update
Glyma.17G256200 No alias ATP-dependent RNA helicase, putative 0.03 Orthogroups_2024-Update
HORVU4Hr1G052730.3 No alias RNA helicase Prp43 of Intron-Lariat Spliceosome complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004386 helicase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004668 protein-arginine deiminase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009445 putrescine metabolic process IEP Predicted GO
BP GO:0009446 putrescine biosynthetic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 773 859
IPR001650 Helicase_C 580 709
IPR011545 DEAD/DEAH_box_helicase_dom 386 535
IPR011709 DUF1605 917 994
No external refs found!