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  5. Bradi3g03710

Bradi3g03710


Description : eukaryotic translation initiation factor 4A1


Gene families : OG_42_0000623 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000623_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g03710
Cluster HCCA clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
A4A49_17386 No alias eukaryotic initiation factor 4a-15 0.03 Orthogroups_2024-Update
A4A49_62264 No alias eukaryotic initiation factor 4a-11 0.02 Orthogroups_2024-Update
At3g19760 No alias Eukaryotic initiation factor 4A-III homolog... 0.02 Orthogroups_2024-Update
Brara.C03756.1 No alias helicase component *(eIF4A3) of RNA quality control Exon... 0.03 Orthogroups_2024-Update
Brara.E02728.1 No alias mRNA unwinding factor *(eIF4A)) 0.03 Orthogroups_2024-Update
Brara.F00053.1 No alias mRNA unwinding factor *(eIF4A)) 0.03 Orthogroups_2024-Update
Glyma.09G065600 No alias eukaryotic translation initiation factor 4A1 0.04 Orthogroups_2024-Update
Glyma.13G106200 No alias eukaryotic translation initiation factor 4A1 0.02 Orthogroups_2024-Update
Glyma.13G347900 No alias eif4a-2 0.02 Orthogroups_2024-Update
Glyma.15G171800 No alias eukaryotic translation initiation factor 4A1 0.04 Orthogroups_2024-Update
Glyma.17G053200 No alias eif4a-2 0.05 Orthogroups_2024-Update
HORVU6Hr1G020910.1 No alias mRNA unwinding factor *(eIF4A)) 0.06 Orthogroups_2024-Update
Kfl00844_0040 kfl00844_0040_v1.1 (q40471|if4a9_tobac : 738.0) Eukaryotic initiation... 0.03 Orthogroups_2024-Update
LOC_Os06g48750 No alias DEAD-box ATP-dependent RNA helicase, putative, expressed 0.02 Orthogroups_2024-Update
Seita.1G089900.1 No alias mRNA unwinding factor *(eIF4A)) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 267 375
IPR011545 DEAD/DEAH_box_helicase_dom 66 227
No external refs found!