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  5. Bradi3g03930

Bradi3g03930


Description : poly(A) polymerase 1


Gene families : OG_42_0001415 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001415_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g03930
Cluster HCCA clusters: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
Glyma.04G086800 No alias nuclear poly(a) polymerase 0.03 Orthogroups_2024-Update
Glyma.07G099400 No alias poly(A) polymerase 1 0.03 Orthogroups_2024-Update
Kfl00261_0030 kfl00261_0030_v1.1 (at4g32850 : 625.0) Encodes a nuclear poly(A)... 0.03 Orthogroups_2024-Update
MA_136671g0010 No alias (at4g32850 : 669.0) Encodes a nuclear poly(A)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0004652 polynucleotide adenylyltransferase activity IEA InterProScan predictions
MF GO:0016779 nucleotidyltransferase activity IEA InterProScan predictions
BP GO:0043631 RNA polyadenylation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0005347 ATP transmembrane transporter activity IEP Predicted GO
MF GO:0005471 ATP:ADP antiporter activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006862 nucleotide transport IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0008514 organic anion transmembrane transporter activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0015215 nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015217 ADP transmembrane transporter activity IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015301 anion:anion antiporter activity IEP Predicted GO
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0099516 ion antiporter activity IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007010 PolA_pol_RNA-bd_dom 357 414
IPR007012 PolA_pol_cen_dom 10 354
IPR002934 Polymerase_NTP_transf_dom 83 136
No external refs found!